Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 AC079328.1-201ENST00000560358 952 ntBASIC19.46■□□□□ 0.71
SCN11AQ9UI33 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SCN11AQ9UI33 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.45■□□□□ 0.7
SCN11AQ9UI33 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 AC024681.1-201ENST00000521917 487 ntBASIC19.45■□□□□ 0.7
SCN11AQ9UI33 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 AC100757.4-201ENST00000626934 759 ntBASIC19.45■□□□□ 0.7
SCN11AQ9UI33 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 TMBIM7P-203ENST00000641617 1718 ntBASIC19.45■□□□□ 0.7
SCN11AQ9UI33 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.45■□□□□ 0.7
SCN11AQ9UI33 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 AC126365.1-201ENST00000578585 1514 ntBASIC19.45■□□□□ 0.7
SCN11AQ9UI33 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN11AQ9UI33 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AC079328.2-201ENST00000561241 3354 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 C18orf15-201ENST00000623680 2534 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AL157407.1-201ENST00000435784 904 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 KLF2P1-201ENST00000447438 1042 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 EEF1DP6-201ENST00000449232 372 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 RN7SL769P-201ENST00000469386 295 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 TMEM198B-204ENST00000484016 896 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 RN7SL720P-201ENST00000488178 304 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 RCC2P8-201ENST00000502779 1035 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AC134698.3-201ENST00000523880 214 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AL805961.1-203ENST00000641078 1258 ntBASIC19.44■□□□□ 0.7
SCN11AQ9UI33 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN11AQ9UI33 MBLAC2-202ENST00000514906 1936 ntBASIC19.43■□□□□ 0.7
SCN11AQ9UI33 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 REXO1L2P-201ENST00000425429 2069 ntBASIC19.43■□□□□ 0.7
SCN11AQ9UI33 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms