Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 HAUS4P1-201ENST00000406739 1145 ntBASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 AC134915.1-201ENST00000426461 574 ntBASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 SLED1-202ENST00000512051 380 ntBASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDAC6Q9UBN7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 BCRP2-202ENST00000447763 634 ntBASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 BCRP6-201ENST00000510112 632 ntBASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 BCRP7-201ENST00000511549 544 ntBASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 AC124283.3-201ENST00000570869 594 ntBASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 AL450472.2-201ENST00000603663 1156 ntBASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 INTS4P2-202ENST00000614726 2019 ntBASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDAC6Q9UBN7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.54■□□□□ 0.4
HDAC6Q9UBN7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms