Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 BRWD1P1-201ENST00000401091 371 ntBASIC18.03■□□□□ 0.48
SH2D4AQ9H788 ACTBP8-201ENST00000403258 1108 ntBASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 ACTBP11-201ENST00000436287 1126 ntBASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 RN7SL219P-201ENST00000582872 296 ntBASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AC010328.2-201ENST00000597698 1111 ntBASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AC145423.3-201ENST00000615987 467 ntBASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AC132938.4-201ENST00000623835 848 ntBASIC18.03■□□□□ 0.48
SH2D4AQ9H788 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.03■□□□□ 0.48
SH2D4AQ9H788 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
SH2D4AQ9H788 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 AL645937.2-201ENST00000396808 931 ntBASIC18.02■□□□□ 0.48
SH2D4AQ9H788 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 AC004066.1-201ENST00000502488 802 ntBASIC18.02■□□□□ 0.48
SH2D4AQ9H788 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH2D4AQ9H788 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 AC011270.2-201ENST00000624293 2550 ntBASIC18.02■□□□□ 0.47
SH2D4AQ9H788 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH2D4AQ9H788 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 AC084364.1-201ENST00000551967 1556 ntBASIC18.01■□□□□ 0.47
SH2D4AQ9H788 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 NFIC-211ENST00000641145 8399 ntBASIC18.01■□□□□ 0.47
SH2D4AQ9H788 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 KLF2P2-201ENST00000416807 1039 ntBASIC18.01■□□□□ 0.47
SH2D4AQ9H788 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH2D4AQ9H788 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms