Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.93□□□□□ -0.02
PIF1Q9H611 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PIF1Q9H611 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.93□□□□□ -0.02
PIF1Q9H611 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PIF1Q9H611 AC145098.2-201ENST00000623593 3026 ntBASIC14.92□□□□□ -0.02
PIF1Q9H611 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PIF1Q9H611 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.92□□□□□ -0.02
PIF1Q9H611 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PIF1Q9H611 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.92□□□□□ -0.02
PIF1Q9H611 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.92□□□□□ -0.02
PIF1Q9H611 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PIF1Q9H611 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.92□□□□□ -0.02
PIF1Q9H611 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.92□□□□□ -0.02
PIF1Q9H611 AL450472.2-201ENST00000603663 1156 ntBASIC14.92□□□□□ -0.02
PIF1Q9H611 AC068137.2-201ENST00000605408 478 ntBASIC14.92□□□□□ -0.02
PIF1Q9H611 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.92□□□□□ -0.02
PIF1Q9H611 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PIF1Q9H611 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.92□□□□□ -0.02
PIF1Q9H611 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.92□□□□□ -0.02
PIF1Q9H611 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.92□□□□□ -0.02
PIF1Q9H611 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PIF1Q9H611 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.92□□□□□ -0.02
PIF1Q9H611 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.91□□□□□ -0.02
PIF1Q9H611 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.91□□□□□ -0.02
PIF1Q9H611 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIF1Q9H611 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PIF1Q9H611 AC004987.2-201ENST00000395959 1148 ntBASIC14.91□□□□□ -0.02
PIF1Q9H611 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.91□□□□□ -0.02
PIF1Q9H611 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.91□□□□□ -0.02
PIF1Q9H611 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.91□□□□□ -0.02
PIF1Q9H611 AC074386.1-202ENST00000463561 864 ntBASIC14.91□□□□□ -0.02
PIF1Q9H611 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.91□□□□□ -0.02
PIF1Q9H611 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms