Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC19.99■□□□□ 0.79
ABCA3Q99758 AL807761.2-201ENST00000422849 729 ntBASIC19.99■□□□□ 0.79
ABCA3Q99758 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.99■□□□□ 0.79
ABCA3Q99758 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC19.99■□□□□ 0.79
ABCA3Q99758 ALG1L13P-202ENST00000519320 584 ntBASIC19.99■□□□□ 0.79
ABCA3Q99758 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC19.99■□□□□ 0.79
ABCA3Q99758 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC19.99■□□□□ 0.79
ABCA3Q99758 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC19.99■□□□□ 0.79
ABCA3Q99758 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA3Q99758 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 AC144522.1-201ENST00000625111 1658 ntBASIC19.98■□□□□ 0.79
ABCA3Q99758 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.98■□□□□ 0.79
ABCA3Q99758 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.98■□□□□ 0.79
ABCA3Q99758 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ABCA3Q99758 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 TSPY25P-201ENST00000429463 745 ntBASIC19.98■□□□□ 0.79
ABCA3Q99758 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC19.98■□□□□ 0.79
ABCA3Q99758 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.98■□□□□ 0.79
ABCA3Q99758 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.98■□□□□ 0.79
ABCA3Q99758 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 AC004837.1-201ENST00000446267 564 ntBASIC19.98■□□□□ 0.79
ABCA3Q99758 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC19.98■□□□□ 0.79
ABCA3Q99758 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC19.98■□□□□ 0.79
ABCA3Q99758 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC19.98■□□□□ 0.79
ABCA3Q99758 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ABCA3Q99758 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.98■□□□□ 0.79
ABCA3Q99758 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.98■□□□□ 0.79
ABCA3Q99758 AC009884.2-201ENST00000603110 324 ntBASIC19.98■□□□□ 0.79
ABCA3Q99758 AL360270.3-201ENST00000609118 1348 ntBASIC19.98■□□□□ 0.79
ABCA3Q99758 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA3Q99758 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ABCA3Q99758 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ABCA3Q99758 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC19.97■□□□□ 0.79
ABCA3Q99758 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC19.97■□□□□ 0.79
ABCA3Q99758 AC026320.2-201ENST00000434379 478 ntBASIC19.97■□□□□ 0.79
ABCA3Q99758 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.97■□□□□ 0.79
ABCA3Q99758 GCOM2-201ENST00000509133 1104 ntBASIC19.97■□□□□ 0.79
ABCA3Q99758 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.97■□□□□ 0.79
ABCA3Q99758 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.97■□□□□ 0.79
ABCA3Q99758 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA3Q99758 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ABCA3Q99758 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ABCA3Q99758 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.97■□□□□ 0.79
ABCA3Q99758 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.97■□□□□ 0.79
ABCA3Q99758 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ABCA3Q99758 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC19.96■□□□□ 0.79
ABCA3Q99758 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC19.96■□□□□ 0.79
ABCA3Q99758 RPSAP15-201ENST00000448168 861 ntBASIC19.96■□□□□ 0.79
ABCA3Q99758 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC19.96■□□□□ 0.79
ABCA3Q99758 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ABCA3Q99758 C2orf69P1-201ENST00000563532 1093 ntBASIC19.96■□□□□ 0.79
ABCA3Q99758 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC19.96■□□□□ 0.79
ABCA3Q99758 AC087392.5-201ENST00000612517 489 ntBASIC19.96■□□□□ 0.79
ABCA3Q99758 AC138466.4-201ENST00000623965 852 ntBASIC19.96■□□□□ 0.79
ABCA3Q99758 AC138466.5-201ENST00000624002 808 ntBASIC19.96■□□□□ 0.79
ABCA3Q99758 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.96■□□□□ 0.79
ABCA3Q99758 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ABCA3Q99758 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.96■□□□□ 0.79
ABCA3Q99758 AL590440.2-201ENST00000641973 1595 ntBASIC19.96■□□□□ 0.79
ABCA3Q99758 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.96■□□□□ 0.79
ABCA3Q99758 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.96■□□□□ 0.79
ABCA3Q99758 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.96■□□□□ 0.79
ABCA3Q99758 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ABCA3Q99758 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA3Q99758 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC19.96■□□□□ 0.79
ABCA3Q99758 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms