Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL607033.1-201ENST00000623900 1599 ntBASIC18.47■□□□□ 0.55
DDX11Q96FC9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 U91328.1-201ENST00000437528 223 ntBASIC18.47■□□□□ 0.55
DDX11Q96FC9 ATP5G2P4-201ENST00000442175 420 ntBASIC18.47■□□□□ 0.55
DDX11Q96FC9 GPR53P-205ENST00000457298 1084 ntBASIC18.47■□□□□ 0.55
DDX11Q96FC9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 AC112693.3-201ENST00000624819 1983 ntBASIC18.47■□□□□ 0.55
DDX11Q96FC9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 AC091951.1-201ENST00000512854 2465 ntBASIC18.47■□□□□ 0.55
DDX11Q96FC9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 AC063926.3-201ENST00000624734 5658 ntBASIC18.47■□□□□ 0.55
DDX11Q96FC9 AC006486.2-201ENST00000624246 2199 ntBASIC18.47■□□□□ 0.55
DDX11Q96FC9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 LINC02228-204ENST00000642115 2962 ntBASIC18.46■□□□□ 0.55
DDX11Q96FC9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 AL512384.1-201ENST00000406683 331 ntBASIC18.46■□□□□ 0.55
DDX11Q96FC9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 AC007274.1-201ENST00000439805 662 ntBASIC18.46■□□□□ 0.55
DDX11Q96FC9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 WASH4P-201ENST00000564273 1246 ntBASIC18.46■□□□□ 0.55
DDX11Q96FC9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 IGHV3-72-202ENST00000621503 303 ntBASIC18.46■□□□□ 0.55
DDX11Q96FC9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
DDX11Q96FC9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 AC023157.3-201ENST00000619086 2088 ntBASIC18.46■□□□□ 0.55
DDX11Q96FC9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX11Q96FC9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
DDX11Q96FC9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
DDX11Q96FC9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
DDX11Q96FC9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
DDX11Q96FC9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms