Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PCDHA14-201ENST00000506751 2298 ntBASIC18.93■□□□□ 0.62
RPGRQ92834 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.93■□□□□ 0.62
RPGRQ92834 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPGRQ92834 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPGRQ92834 AP003680.1-201ENST00000598970 3660 ntBASIC18.93■□□□□ 0.62
RPGRQ92834 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPGRQ92834 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPGRQ92834 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.92■□□□□ 0.62
RPGRQ92834 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.92■□□□□ 0.62
RPGRQ92834 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RPGRQ92834 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RPGRQ92834 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.92■□□□□ 0.62
RPGRQ92834 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.92■□□□□ 0.62
RPGRQ92834 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.92■□□□□ 0.62
RPGRQ92834 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.92■□□□□ 0.62
RPGRQ92834 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 AC106820.3-201ENST00000561653 397 ntBASIC18.92■□□□□ 0.62
RPGRQ92834 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.92■□□□□ 0.62
RPGRQ92834 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.92■□□□□ 0.62
RPGRQ92834 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.92■□□□□ 0.62
RPGRQ92834 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.92■□□□□ 0.62
RPGRQ92834 AC097724.1-201ENST00000609581 426 ntBASIC18.92■□□□□ 0.62
RPGRQ92834 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.92■□□□□ 0.62
RPGRQ92834 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPGRQ92834 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
RPGRQ92834 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RPGRQ92834 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPGRQ92834 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RPGRQ92834 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.92■□□□□ 0.62
RPGRQ92834 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.91■□□□□ 0.62
RPGRQ92834 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.91■□□□□ 0.62
RPGRQ92834 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.91■□□□□ 0.62
RPGRQ92834 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.91■□□□□ 0.62
RPGRQ92834 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.91■□□□□ 0.62
RPGRQ92834 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.91■□□□□ 0.62
RPGRQ92834 HINT2P1-201ENST00000419438 481 ntBASIC18.91■□□□□ 0.62
RPGRQ92834 AL354877.1-201ENST00000424412 413 ntBASIC18.91■□□□□ 0.62
RPGRQ92834 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.91■□□□□ 0.62
RPGRQ92834 AC021723.1-201ENST00000486306 515 ntBASIC18.91■□□□□ 0.62
RPGRQ92834 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.91■□□□□ 0.62
RPGRQ92834 AC100850.1-201ENST00000506768 649 ntBASIC18.91■□□□□ 0.62
RPGRQ92834 AC005740.2-201ENST00000511085 419 ntBASIC18.91■□□□□ 0.62
RPGRQ92834 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.91■□□□□ 0.62
RPGRQ92834 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPGRQ92834 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.91■□□□□ 0.62
RPGRQ92834 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.91■□□□□ 0.62
RPGRQ92834 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.91■□□□□ 0.62
RPGRQ92834 AC091544.8-201ENST00000619490 361 ntBASIC18.91■□□□□ 0.62
RPGRQ92834 AL603764.1-201ENST00000636452 321 ntBASIC18.91■□□□□ 0.62
RPGRQ92834 AL645728.2-202ENST00000641679 227 ntBASIC18.91■□□□□ 0.62
RPGRQ92834 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.91■□□□□ 0.62
RPGRQ92834 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
RPGRQ92834 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.91■□□□□ 0.62
RPGRQ92834 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.91■□□□□ 0.62
RPGRQ92834 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPGRQ92834 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
RPGRQ92834 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 AC055811.4-201ENST00000624039 1754 ntBASIC18.91■□□□□ 0.62
RPGRQ92834 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.91■□□□□ 0.62
RPGRQ92834 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPGRQ92834 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
RPGRQ92834 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.9■□□□□ 0.62
RPGRQ92834 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPGRQ92834 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.9■□□□□ 0.62
RPGRQ92834 CHMP1AP1-201ENST00000445563 662 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms