Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 AC093813.1-201ENST00000605066 256 ntBASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 OR6D1P-203ENST00000641209 4860 ntBASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHKBP1Q8TBC3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 AL596087.1-201ENST00000400979 1969 ntBASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 AC022137.2-201ENST00000503482 481 ntBASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 AP001582.1-201ENST00000525856 295 ntBASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 KRT90P-201ENST00000549264 1064 ntBASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 GNRHR2-203ENST00000581100 1187 ntBASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHKBP1Q8TBC3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 TUBB1P2-201ENST00000422712 1306 ntBASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 TUBB1P1-201ENST00000503144 1300 ntBASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 ACKR1-201ENST00000368121 1240 ntBASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 RN7SL219P-201ENST00000582872 296 ntBASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.27■□□□□ 0.2
SHKBP1Q8TBC3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.27■□□□□ 0.19
SHKBP1Q8TBC3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHKBP1Q8TBC3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.27■□□□□ 0.19
SHKBP1Q8TBC3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHKBP1Q8TBC3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SHKBP1Q8TBC3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SHKBP1Q8TBC3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.27■□□□□ 0.19
SHKBP1Q8TBC3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms