Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 AC020922.3-201ENST00000595064 547 ntBASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 AC026316.1-201ENST00000398900 414 ntBASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 LINC02199-201ENST00000506655 2702 ntBASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 AC132192.2-201ENST00000596206 1147 ntBASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 BID-213ENST00000615414 2236 ntTSL 5 BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CFAP43Q8NDM7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 AC006335.1-201ENST00000445200 547 ntBASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 RNMTL1P1-201ENST00000454103 560 ntBASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 MIR4754-201ENST00000582477 89 ntBASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 ISCA2P1-201ENST00000425548 448 ntBASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 AC138466.3-201ENST00000619983 221 ntBASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 PCBP2-OT1-201ENST00000634357 590 ntBASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 AC006453.1-201ENST00000636037 1257 ntBASIC23.67■■□□□ 1.38
CFAP43Q8NDM7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 AC242376.1-201ENST00000559033 726 ntBASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 EID1-202ENST00000560490 584 ntTSL 3 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC23.66■■□□□ 1.38
CFAP43Q8NDM7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms