Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 KRT8P22-201ENST00000562317 1415 ntBASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 MROH4P-201ENST00000431302 1578 ntBASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AC007787.1-201ENST00000588095 1583 ntBASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 C1QBPP1-201ENST00000400117 770 ntBASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AL035633.1-201ENST00000406139 838 ntBASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AC133539.2-201ENST00000604757 467 ntBASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 LINC02084-201ENST00000606069 1096 ntBASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.68□□□□□ -0.22
ZIC4Q8N9L1 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 AC093525.8-201ENST00000624099 1342 ntBASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 AC004066.1-201ENST00000502488 802 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms