Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 AL512356.2-201ENST00000546955 174 ntBASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 MIR6069-201ENST00000620069 79 ntBASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 CICP24-201ENST00000605464 2705 ntBASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00346Q8IVM7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 AC084364.1-201ENST00000551967 1556 ntBASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 LINC00528-201ENST00000600723 2160 ntBASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 AL139400.1-201ENST00000366220 510 ntBASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 RPL37AP1-201ENST00000412502 279 ntBASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 AC074338.1-201ENST00000416825 156 ntBASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 Z92544.3-201ENST00000624747 417 ntBASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 AL513477.1-201ENST00000602865 2407 ntBASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 AC106881.1-201ENST00000605849 3329 ntBASIC13.79□□□□□ -0.2
LINC00346Q8IVM7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 KRT18P64-201ENST00000434946 1219 ntBASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 SERBP1P3-201ENST00000459980 809 ntBASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms