Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
H3F3CQ6NXT2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 AC018665.1-201ENST00000622927 1362 ntBASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 BAATP1-201ENST00000412284 1225 ntBASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 AC234783.1-201ENST00000441761 496 ntBASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 AC068587.3-201ENST00000526613 355 ntBASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 AL022328.1-201ENST00000610050 478 ntBASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 AC099063.4-201ENST00000641099 1602 ntBASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3F3CQ6NXT2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 MIR658-201ENST00000385210 100 ntBASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 AC093433.1-201ENST00000458048 571 ntBASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 AC119751.2-201ENST00000504529 210 ntBASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 AP001889.1-201ENST00000525414 633 ntBASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 AC107373.2-201ENST00000607735 490 ntBASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 NORAD-201ENST00000565493 5339 ntBASIC14.36□□□□□ -0.11
H3F3CQ6NXT2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms