Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 AL627389.1-201ENST00000413508 1182 ntBASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPAQ5VT25 AC012508.2-201ENST00000567613 1472 ntBASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 AC051619.9-201ENST00000623237 597 ntBASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 PRORSD1P-202ENST00000563365 2154 ntBASIC22.83■■□□□ 1.25
CDC42BPAQ5VT25 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC22.83■■□□□ 1.24
CDC42BPAQ5VT25 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDC42BPAQ5VT25 AP000845.1-201ENST00000581677 2131 ntBASIC22.83■■□□□ 1.24
CDC42BPAQ5VT25 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC22.83■■□□□ 1.24
CDC42BPAQ5VT25 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 RPS15-202ENST00000585665 467 ntTSL 3 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 TBC1D3J-201ENST00000620719 1426 ntBASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 OR2K2-202ENST00000374428 1038 ntBASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 PFN2-202ENST00000423691 911 ntTSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 GCOM2-201ENST00000509133 1104 ntBASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 LY6E-208ENST00000520531 490 ntTSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 RN7SL736P-201ENST00000613111 269 ntBASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 NAP1L6-202ENST00000641404 1222 ntBASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 BANP-204ENST00000393208 2283 ntTSL 2 BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPAQ5VT25 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms