Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 RPS2P32-201ENST00000439199 892 ntBASIC17.77■□□□□ 0.44
USH1GQ495M9 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.77■□□□□ 0.44
USH1GQ495M9 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.77■□□□□ 0.44
USH1GQ495M9 KLF2P4-201ENST00000451959 1225 ntBASIC17.77■□□□□ 0.44
USH1GQ495M9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.77■□□□□ 0.44
USH1GQ495M9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.77■□□□□ 0.44
USH1GQ495M9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.77■□□□□ 0.44
USH1GQ495M9 AC022137.2-201ENST00000503482 481 ntBASIC17.77■□□□□ 0.44
USH1GQ495M9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.77■□□□□ 0.44
USH1GQ495M9 AP005482.1-201ENST00000563722 1273 ntBASIC17.77■□□□□ 0.44
USH1GQ495M9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.77■□□□□ 0.44
USH1GQ495M9 AC244669.2-201ENST00000612320 853 ntBASIC17.77■□□□□ 0.44
USH1GQ495M9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.77■□□□□ 0.44
USH1GQ495M9 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
USH1GQ495M9 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.77■□□□□ 0.44
USH1GQ495M9 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.77■□□□□ 0.44
USH1GQ495M9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.77■□□□□ 0.44
USH1GQ495M9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
USH1GQ495M9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USH1GQ495M9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
USH1GQ495M9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USH1GQ495M9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.77■□□□□ 0.44
USH1GQ495M9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
USH1GQ495M9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
USH1GQ495M9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
USH1GQ495M9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.77■□□□□ 0.43
USH1GQ495M9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
USH1GQ495M9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
USH1GQ495M9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
USH1GQ495M9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.77■□□□□ 0.43
USH1GQ495M9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
USH1GQ495M9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.76■□□□□ 0.43
USH1GQ495M9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.76■□□□□ 0.43
USH1GQ495M9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
USH1GQ495M9 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.76■□□□□ 0.43
USH1GQ495M9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.76■□□□□ 0.43
USH1GQ495M9 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.76■□□□□ 0.43
USH1GQ495M9 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
USH1GQ495M9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.76■□□□□ 0.43
USH1GQ495M9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.76■□□□□ 0.43
USH1GQ495M9 AC007551.1-201ENST00000457394 519 ntBASIC17.76■□□□□ 0.43
USH1GQ495M9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.76■□□□□ 0.43
USH1GQ495M9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
USH1GQ495M9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.76■□□□□ 0.43
USH1GQ495M9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.76■□□□□ 0.43
USH1GQ495M9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.76■□□□□ 0.43
USH1GQ495M9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.76■□□□□ 0.43
USH1GQ495M9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.76■□□□□ 0.43
USH1GQ495M9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USH1GQ495M9 NFIC-211ENST00000641145 8399 ntBASIC17.76■□□□□ 0.43
USH1GQ495M9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.75■□□□□ 0.43
USH1GQ495M9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.75■□□□□ 0.43
USH1GQ495M9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.75■□□□□ 0.43
USH1GQ495M9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USH1GQ495M9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USH1GQ495M9 AC132872.4-202ENST00000622924 2756 ntBASIC17.75■□□□□ 0.43
USH1GQ495M9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.75■□□□□ 0.43
USH1GQ495M9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
USH1GQ495M9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 RNU1-114P-201ENST00000365297 166 ntBASIC17.75■□□□□ 0.43
USH1GQ495M9 ACKR1-201ENST00000368121 1240 ntBASIC17.75■□□□□ 0.43
USH1GQ495M9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.75■□□□□ 0.43
USH1GQ495M9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.75■□□□□ 0.43
USH1GQ495M9 BNIP3P42-201ENST00000454982 569 ntBASIC17.75■□□□□ 0.43
USH1GQ495M9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.75■□□□□ 0.43
USH1GQ495M9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.75■□□□□ 0.43
USH1GQ495M9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
USH1GQ495M9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.75■□□□□ 0.43
USH1GQ495M9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.75■□□□□ 0.43
USH1GQ495M9 BNIP3P29-201ENST00000598302 571 ntBASIC17.75■□□□□ 0.43
USH1GQ495M9 AC011447.5-201ENST00000616168 564 ntBASIC17.75■□□□□ 0.43
USH1GQ495M9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms