Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
COL16A1Q07092 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC20.2■□□□□ 0.82
COL16A1Q07092 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC20.2■□□□□ 0.82
COL16A1Q07092 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 AC092171.3-201ENST00000610122 2651 ntBASIC20.2■□□□□ 0.82
COL16A1Q07092 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL16A1Q07092 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
COL16A1Q07092 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
COL16A1Q07092 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL16A1Q07092 AC124067.4-201ENST00000519691 2379 ntBASIC20.2■□□□□ 0.82
COL16A1Q07092 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL16A1Q07092 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 CTSL-202ENST00000342020 933 ntTSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 AC023141.7-201ENST00000430646 407 ntBASIC20.2■□□□□ 0.82
COL16A1Q07092 KRT18P46-201ENST00000435568 1279 ntBASIC20.2■□□□□ 0.82
COL16A1Q07092 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC20.2■□□□□ 0.82
COL16A1Q07092 CICP12-201ENST00000455801 843 ntBASIC20.2■□□□□ 0.82
COL16A1Q07092 PPIA-208ENST00000489459 907 ntTSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 MIR2392-201ENST00000584881 84 ntBASIC20.2■□□□□ 0.82
COL16A1Q07092 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 PPIA-210ENST00000620047 827 ntTSL 5 BASIC20.2■□□□□ 0.82
COL16A1Q07092 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL16A1Q07092 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
COL16A1Q07092 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.19■□□□□ 0.82
COL16A1Q07092 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL16A1Q07092 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL16A1Q07092 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
COL16A1Q07092 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL16A1Q07092 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL16A1Q07092 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL16A1Q07092 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC20.19■□□□□ 0.82
COL16A1Q07092 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL16A1Q07092 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL16A1Q07092 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL16A1Q07092 PTGER4P2-201ENST00000328411 252 ntBASIC20.19■□□□□ 0.82
COL16A1Q07092 MIR566-201ENST00000385187 94 ntBASIC20.19■□□□□ 0.82
COL16A1Q07092 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC20.19■□□□□ 0.82
COL16A1Q07092 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC20.19■□□□□ 0.82
COL16A1Q07092 PTGER4P3-201ENST00000458150 252 ntBASIC20.19■□□□□ 0.82
COL16A1Q07092 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC20.19■□□□□ 0.82
COL16A1Q07092 AC010632.2-201ENST00000588369 1224 ntBASIC20.19■□□□□ 0.82
COL16A1Q07092 AP005264.6-204ENST00000588436 719 ntBASIC20.19■□□□□ 0.82
COL16A1Q07092 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
COL16A1Q07092 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL16A1Q07092 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.19■□□□□ 0.82
COL16A1Q07092 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL16A1Q07092 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL16A1Q07092 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL16A1Q07092 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL16A1Q07092 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL16A1Q07092 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL16A1Q07092 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
COL16A1Q07092 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL16A1Q07092 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL16A1Q07092 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL16A1Q07092 AC108734.2-201ENST00000420887 1069 ntBASIC20.18■□□□□ 0.82
COL16A1Q07092 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC20.18■□□□□ 0.82
COL16A1Q07092 AC083801.1-201ENST00000491689 358 ntBASIC20.18■□□□□ 0.82
COL16A1Q07092 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC20.18■□□□□ 0.82
COL16A1Q07092 ELP5-212ENST00000574255 671 ntTSL 2 BASIC20.18■□□□□ 0.82
COL16A1Q07092 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
COL16A1Q07092 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC20.18■□□□□ 0.82
COL16A1Q07092 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
COL16A1Q07092 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.17■□□□□ 0.82
COL16A1Q07092 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL16A1Q07092 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
COL16A1Q07092 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COL16A1Q07092 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
COL16A1Q07092 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL16A1Q07092 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC20.17■□□□□ 0.82
COL16A1Q07092 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL16A1Q07092 USB1-205ENST00000561743 1135 ntTSL 3 BASIC20.17■□□□□ 0.82
COL16A1Q07092 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC20.17■□□□□ 0.82
COL16A1Q07092 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC20.17■□□□□ 0.82
COL16A1Q07092 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC20.17■□□□□ 0.82
COL16A1Q07092 AC140113.1-201ENST00000603467 169 ntBASIC20.17■□□□□ 0.82
COL16A1Q07092 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC20.17■□□□□ 0.82
COL16A1Q07092 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL16A1Q07092 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.17■□□□□ 0.82
COL16A1Q07092 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
COL16A1Q07092 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL16A1Q07092 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC20.17■□□□□ 0.82
COL16A1Q07092 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.17■□□□□ 0.82
COL16A1Q07092 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL16A1Q07092 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
COL16A1Q07092 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms