Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.85□□□□□ -0.19
GFRA1P56159 AC234783.1-201ENST00000441761 496 ntBASIC13.85□□□□□ -0.19
GFRA1P56159 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.85□□□□□ -0.19
GFRA1P56159 AC106760.1-201ENST00000508690 800 ntBASIC13.85□□□□□ -0.19
GFRA1P56159 KRT18P25-201ENST00000508931 1278 ntBASIC13.85□□□□□ -0.19
GFRA1P56159 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.85□□□□□ -0.19
GFRA1P56159 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.85□□□□□ -0.19
GFRA1P56159 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.85□□□□□ -0.19
GFRA1P56159 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GFRA1P56159 AC017083.2-201ENST00000608069 979 ntBASIC13.85□□□□□ -0.19
GFRA1P56159 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.85□□□□□ -0.19
GFRA1P56159 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.85□□□□□ -0.19
GFRA1P56159 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.84□□□□□ -0.19
GFRA1P56159 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.84□□□□□ -0.19
GFRA1P56159 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
GFRA1P56159 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.84□□□□□ -0.19
GFRA1P56159 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 MST1L-201ENST00000442552 2185 ntBASIC13.84□□□□□ -0.19
GFRA1P56159 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.84□□□□□ -0.19
GFRA1P56159 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 MIR1909-201ENST00000411312 80 ntBASIC13.84□□□□□ -0.19
GFRA1P56159 AC114812.1-204ENST00000449669 728 ntBASIC13.84□□□□□ -0.19
GFRA1P56159 AC022210.1-201ENST00000449856 793 ntBASIC13.84□□□□□ -0.19
GFRA1P56159 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
GFRA1P56159 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.84□□□□□ -0.19
GFRA1P56159 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.84□□□□□ -0.19
GFRA1P56159 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.84□□□□□ -0.19
GFRA1P56159 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.84□□□□□ -0.19
GFRA1P56159 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.84□□□□□ -0.19
GFRA1P56159 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
GFRA1P56159 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
GFRA1P56159 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
GFRA1P56159 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.84□□□□□ -0.19
GFRA1P56159 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GFRA1P56159 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
GFRA1P56159 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.83□□□□□ -0.19
GFRA1P56159 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
GFRA1P56159 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms