Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
BRPF1P55201 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRPF1P55201 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
BRPF1P55201 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.7■□□□□ 0.74
BRPF1P55201 AC007787.1-201ENST00000588095 1583 ntBASIC19.7■□□□□ 0.74
BRPF1P55201 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.7■□□□□ 0.74
BRPF1P55201 AL645937.2-201ENST00000396808 931 ntBASIC19.7■□□□□ 0.74
BRPF1P55201 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.7■□□□□ 0.74
BRPF1P55201 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.7■□□□□ 0.74
BRPF1P55201 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.7■□□□□ 0.74
BRPF1P55201 AC012508.2-201ENST00000567613 1472 ntBASIC19.7■□□□□ 0.74
BRPF1P55201 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 AL138799.1-201ENST00000448213 1675 ntBASIC19.7■□□□□ 0.74
BRPF1P55201 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.7■□□□□ 0.74
BRPF1P55201 AC091951.1-201ENST00000512854 2465 ntBASIC19.7■□□□□ 0.74
BRPF1P55201 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRPF1P55201 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.7■□□□□ 0.74
BRPF1P55201 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
BRPF1P55201 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.7■□□□□ 0.74
BRPF1P55201 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
BRPF1P55201 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 AGAP7P-201ENST00000582299 2062 ntBASIC19.69■□□□□ 0.74
BRPF1P55201 AGAP14-201ENST00000624701 2060 ntBASIC19.69■□□□□ 0.74
BRPF1P55201 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.69■□□□□ 0.74
BRPF1P55201 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.69■□□□□ 0.74
BRPF1P55201 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.69■□□□□ 0.74
BRPF1P55201 VDAC1P7-201ENST00000462417 847 ntBASIC19.69■□□□□ 0.74
BRPF1P55201 AC123567.1-201ENST00000548294 1261 ntBASIC19.69■□□□□ 0.74
BRPF1P55201 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.69■□□□□ 0.74
BRPF1P55201 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.69■□□□□ 0.74
BRPF1P55201 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.69■□□□□ 0.74
BRPF1P55201 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.69■□□□□ 0.74
BRPF1P55201 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
BRPF1P55201 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.69■□□□□ 0.74
BRPF1P55201 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
BRPF1P55201 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
BRPF1P55201 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRPF1P55201 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.69■□□□□ 0.74
BRPF1P55201 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
BRPF1P55201 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.68■□□□□ 0.74
BRPF1P55201 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 INTS4P2-202ENST00000614726 2019 ntBASIC19.68■□□□□ 0.74
BRPF1P55201 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.68■□□□□ 0.74
BRPF1P55201 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
BRPF1P55201 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 ELK1P1-201ENST00000485699 580 ntBASIC19.68■□□□□ 0.74
BRPF1P55201 AC004066.1-201ENST00000502488 802 ntBASIC19.68■□□□□ 0.74
BRPF1P55201 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.68■□□□□ 0.74
BRPF1P55201 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.68■□□□□ 0.74
BRPF1P55201 AC120045.2-201ENST00000567334 178 ntBASIC19.68■□□□□ 0.74
BRPF1P55201 MIR4259-201ENST00000584466 101 ntBASIC19.68■□□□□ 0.74
BRPF1P55201 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.68■□□□□ 0.74
BRPF1P55201 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.68■□□□□ 0.74
BRPF1P55201 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.68■□□□□ 0.74
BRPF1P55201 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.68■□□□□ 0.74
BRPF1P55201 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRPF1P55201 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRPF1P55201 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.67■□□□□ 0.74
BRPF1P55201 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
BRPF1P55201 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms