Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.62■□□□□ 0.25
RAD23BP54727 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD23BP54727 AL132655.2-201ENST00000596276 594 ntBASIC16.62■□□□□ 0.25
RAD23BP54727 AC092364.2-202ENST00000597012 1073 ntBASIC16.62■□□□□ 0.25
RAD23BP54727 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.62■□□□□ 0.25
RAD23BP54727 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 AC004233.3-201ENST00000607794 1269 ntBASIC16.62■□□□□ 0.25
RAD23BP54727 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD23BP54727 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD23BP54727 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.62■□□□□ 0.25
RAD23BP54727 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.62■□□□□ 0.25
RAD23BP54727 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD23BP54727 TNRC18P2-201ENST00000417666 2714 ntBASIC16.61■□□□□ 0.25
RAD23BP54727 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
RAD23BP54727 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 AC007541.1-201ENST00000570282 1469 ntBASIC16.61■□□□□ 0.25
RAD23BP54727 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
RAD23BP54727 AC073347.1-201ENST00000421633 2643 ntBASIC16.61■□□□□ 0.25
RAD23BP54727 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
RAD23BP54727 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.61■□□□□ 0.25
RAD23BP54727 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.61■□□□□ 0.25
RAD23BP54727 MEP1AP4-201ENST00000423244 1087 ntBASIC16.61■□□□□ 0.25
RAD23BP54727 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 RN7SL399P-201ENST00000471648 279 ntBASIC16.61■□□□□ 0.25
RAD23BP54727 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.61■□□□□ 0.25
RAD23BP54727 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.61■□□□□ 0.25
RAD23BP54727 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.61■□□□□ 0.25
RAD23BP54727 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 AC022532.1-201ENST00000624563 1728 ntBASIC16.61■□□□□ 0.25
RAD23BP54727 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.61■□□□□ 0.25
RAD23BP54727 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 AC013268.4-201ENST00000637413 2228 ntBASIC16.61■□□□□ 0.25
RAD23BP54727 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAD23BP54727 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAD23BP54727 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.6■□□□□ 0.25
RAD23BP54727 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAD23BP54727 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 DFFBP1-201ENST00000433250 979 ntBASIC16.6■□□□□ 0.25
RAD23BP54727 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAD23BP54727 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.6■□□□□ 0.25
RAD23BP54727 AC055876.2-201ENST00000531834 546 ntBASIC16.6■□□□□ 0.25
RAD23BP54727 API5-211ENST00000534695 560 ntTSL 5 BASIC16.6■□□□□ 0.25
RAD23BP54727 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.6■□□□□ 0.25
RAD23BP54727 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms