Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTGFP29279 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.12■□□□□ 0.33
CTGFP29279 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.12■□□□□ 0.33
CTGFP29279 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.12■□□□□ 0.33
CTGFP29279 RN7SKP230-201ENST00000365642 335 ntBASIC17.12■□□□□ 0.33
CTGFP29279 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.12■□□□□ 0.33
CTGFP29279 RPL7P35-201ENST00000446943 740 ntBASIC17.12■□□□□ 0.33
CTGFP29279 PIN4P1-201ENST00000451079 396 ntBASIC17.12■□□□□ 0.33
CTGFP29279 RN7SL258P-201ENST00000478664 300 ntBASIC17.12■□□□□ 0.33
CTGFP29279 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CTGFP29279 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CTGFP29279 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.12■□□□□ 0.33
CTGFP29279 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.12■□□□□ 0.33
CTGFP29279 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.12■□□□□ 0.33
CTGFP29279 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.12■□□□□ 0.33
CTGFP29279 AC005962.1-201ENST00000584100 773 ntBASIC17.12■□□□□ 0.33
CTGFP29279 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.12■□□□□ 0.33
CTGFP29279 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.12■□□□□ 0.33
CTGFP29279 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.12■□□□□ 0.33
CTGFP29279 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.12■□□□□ 0.33
CTGFP29279 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTGFP29279 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.12■□□□□ 0.33
CTGFP29279 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTGFP29279 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.12■□□□□ 0.33
CTGFP29279 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 AC020916.1-201ENST00000587762 1774 ntBASIC17.12■□□□□ 0.33
CTGFP29279 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CTGFP29279 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTGFP29279 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.11■□□□□ 0.33
CTGFP29279 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CTGFP29279 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CTGFP29279 AL512430.1-201ENST00000392575 860 ntBASIC17.11■□□□□ 0.33
CTGFP29279 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.11■□□□□ 0.33
CTGFP29279 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.11■□□□□ 0.33
CTGFP29279 POU5F1P2-201ENST00000521750 823 ntBASIC17.11■□□□□ 0.33
CTGFP29279 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.11■□□□□ 0.33
CTGFP29279 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.11■□□□□ 0.33
CTGFP29279 RBM8B-201ENST00000555532 525 ntBASIC17.11■□□□□ 0.33
CTGFP29279 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.11■□□□□ 0.33
CTGFP29279 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CTGFP29279 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CTGFP29279 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.11■□□□□ 0.33
CTGFP29279 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.11■□□□□ 0.33
CTGFP29279 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 KRT8P21-201ENST00000430398 1491 ntBASIC17.11■□□□□ 0.33
CTGFP29279 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 TNRC18P3-201ENST00000441896 2691 ntBASIC17.11■□□□□ 0.33
CTGFP29279 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CTGFP29279 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTGFP29279 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CTGFP29279 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTGFP29279 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CTGFP29279 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTGFP29279 MIR1227-201ENST00000408484 88 ntBASIC17.1■□□□□ 0.33
CTGFP29279 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.1■□□□□ 0.33
CTGFP29279 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.1■□□□□ 0.33
CTGFP29279 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.1■□□□□ 0.33
CTGFP29279 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms