Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.31■□□□□ 0.36
RARBP10826 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RARBP10826 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.31■□□□□ 0.36
RARBP10826 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 AC148477.4-201ENST00000613430 1793 ntBASIC17.3■□□□□ 0.36
RARBP10826 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RARBP10826 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RARBP10826 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.3■□□□□ 0.36
RARBP10826 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.3■□□□□ 0.36
RARBP10826 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RARBP10826 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.3■□□□□ 0.36
RARBP10826 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.3■□□□□ 0.36
RARBP10826 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.3■□□□□ 0.36
RARBP10826 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RARBP10826 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 AC105129.2-201ENST00000559536 390 ntBASIC17.3■□□□□ 0.36
RARBP10826 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.3■□□□□ 0.36
RARBP10826 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.3■□□□□ 0.36
RARBP10826 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.3■□□□□ 0.36
RARBP10826 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 AL451050.2-201ENST00000606967 682 ntBASIC17.3■□□□□ 0.36
RARBP10826 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
RARBP10826 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RARBP10826 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RARBP10826 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
RARBP10826 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RARBP10826 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RARBP10826 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.29■□□□□ 0.36
RARBP10826 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.29■□□□□ 0.36
RARBP10826 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.29■□□□□ 0.36
RARBP10826 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 EIF4HP1-201ENST00000453115 687 ntBASIC17.29■□□□□ 0.36
RARBP10826 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.29■□□□□ 0.36
RARBP10826 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RARBP10826 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.29■□□□□ 0.36
RARBP10826 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.29■□□□□ 0.36
RARBP10826 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RARBP10826 AC025181.2-201ENST00000606994 802 ntBASIC17.29■□□□□ 0.36
RARBP10826 AC244157.2-201ENST00000616239 1006 ntBASIC17.29■□□□□ 0.36
RARBP10826 ENPP7P14-201ENST00000621765 1040 ntBASIC17.29■□□□□ 0.36
RARBP10826 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.29■□□□□ 0.36
RARBP10826 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RARBP10826 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.29■□□□□ 0.36
RARBP10826 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 AL662844.4-201ENST00000606367 2838 ntBASIC17.29■□□□□ 0.36
RARBP10826 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RARBP10826 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RARBP10826 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.28■□□□□ 0.36
RARBP10826 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
RARBP10826 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
RARBP10826 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.28■□□□□ 0.36
RARBP10826 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.28■□□□□ 0.36
RARBP10826 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.28■□□□□ 0.36
RARBP10826 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.28■□□□□ 0.36
RARBP10826 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.28■□□□□ 0.36
RARBP10826 AC138627.1-207ENST00000641560 1006 ntBASIC17.28■□□□□ 0.36
RARBP10826 PRSS30P-206ENST00000641773 873 ntBASIC17.28■□□□□ 0.36
RARBP10826 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RARBP10826 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.28■□□□□ 0.36
RARBP10826 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms