Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.56■□□□□ 0.24
FAM228BP0C875 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
FAM228BP0C875 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.56■□□□□ 0.24
FAM228BP0C875 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM228BP0C875 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
FAM228BP0C875 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 BX842568.4-201ENST00000421222 227 ntBASIC16.56■□□□□ 0.24
FAM228BP0C875 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
FAM228BP0C875 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 AL512356.2-201ENST00000546955 174 ntBASIC16.56■□□□□ 0.24
FAM228BP0C875 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM228BP0C875 LINC01115-203ENST00000606068 577 ntBASIC16.56■□□□□ 0.24
FAM228BP0C875 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
FAM228BP0C875 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.56■□□□□ 0.24
FAM228BP0C875 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
FAM228BP0C875 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FAM228BP0C875 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.55■□□□□ 0.24
FAM228BP0C875 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.55■□□□□ 0.24
FAM228BP0C875 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
FAM228BP0C875 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
FAM228BP0C875 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 AL133267.1-201ENST00000398220 340 ntBASIC16.55■□□□□ 0.24
FAM228BP0C875 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 AC211486.1-202ENST00000416371 468 ntBASIC16.55■□□□□ 0.24
FAM228BP0C875 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
FAM228BP0C875 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.55■□□□□ 0.24
FAM228BP0C875 AC211476.1-201ENST00000503899 468 ntBASIC16.55■□□□□ 0.24
FAM228BP0C875 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FAM228BP0C875 AC027612.4-201ENST00000605371 583 ntBASIC16.55■□□□□ 0.24
FAM228BP0C875 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.55■□□□□ 0.24
FAM228BP0C875 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.55■□□□□ 0.24
FAM228BP0C875 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.55■□□□□ 0.24
FAM228BP0C875 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FAM228BP0C875 REXO1L4P-201ENST00000605109 1937 ntBASIC16.55■□□□□ 0.24
FAM228BP0C875 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
FAM228BP0C875 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.54■□□□□ 0.24
FAM228BP0C875 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FAM228BP0C875 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
FAM228BP0C875 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.54■□□□□ 0.24
FAM228BP0C875 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.54■□□□□ 0.24
FAM228BP0C875 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.54■□□□□ 0.24
FAM228BP0C875 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 AC067930.6-201ENST00000623257 4947 ntBASIC16.54■□□□□ 0.24
FAM228BP0C875 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FAM228BP0C875 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms