Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 MROH4P-201ENST00000431302 1578 ntBASIC15.71■□□□□ 0.11
HLA-DQB2P05538 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.71■□□□□ 0.11
HLA-DQB2P05538 AC098850.1-201ENST00000419919 790 ntBASIC15.71■□□□□ 0.11
HLA-DQB2P05538 VDAC1P7-201ENST00000462417 847 ntBASIC15.71■□□□□ 0.11
HLA-DQB2P05538 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 CHCHD2P3-201ENST00000603038 451 ntBASIC15.71■□□□□ 0.11
HLA-DQB2P05538 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.71■□□□□ 0.11
HLA-DQB2P05538 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 AL645728.2-202ENST00000641679 227 ntBASIC15.71■□□□□ 0.11
HLA-DQB2P05538 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DQB2P05538 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.71■□□□□ 0.1
HLA-DQB2P05538 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DQB2P05538 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
HLA-DQB2P05538 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
HLA-DQB2P05538 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DQB2P05538 AL596257.1-201ENST00000641463 2694 ntBASIC15.71■□□□□ 0.1
HLA-DQB2P05538 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.71■□□□□ 0.1
HLA-DQB2P05538 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 DRD5P1-201ENST00000456605 1438 ntBASIC15.7■□□□□ 0.1
HLA-DQB2P05538 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 API5-211ENST00000534695 560 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 BRI3BPP1-201ENST00000594224 787 ntBASIC15.7■□□□□ 0.1
HLA-DQB2P05538 AC107373.2-201ENST00000607735 490 ntBASIC15.7■□□□□ 0.1
HLA-DQB2P05538 AC093726.1-201ENST00000608064 963 ntBASIC15.7■□□□□ 0.1
HLA-DQB2P05538 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 AGAP7P-201ENST00000582299 2062 ntBASIC15.7■□□□□ 0.1
HLA-DQB2P05538 AGAP14-201ENST00000624701 2060 ntBASIC15.7■□□□□ 0.1
HLA-DQB2P05538 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DQB2P05538 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms