Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CD74P04233 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD74P04233 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD74P04233 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD74P04233 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD74P04233 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.09□□□□□ -0.31
CD74P04233 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.09□□□□□ -0.31
CD74P04233 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CD74P04233 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD74P04233 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD74P04233 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.09□□□□□ -0.31
CD74P04233 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CD74P04233 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD74P04233 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CD74P04233 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CD74P04233 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.08□□□□□ -0.31
CD74P04233 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.08□□□□□ -0.32
CD74P04233 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.08□□□□□ -0.32
CD74P04233 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.08□□□□□ -0.32
CD74P04233 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
CD74P04233 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.08□□□□□ -0.32
CD74P04233 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.08□□□□□ -0.32
CD74P04233 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 RPS2P28-201ENST00000314255 741 ntBASIC13.08□□□□□ -0.32
CD74P04233 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.08□□□□□ -0.32
CD74P04233 CRYGEP-201ENST00000412192 528 ntBASIC13.08□□□□□ -0.32
CD74P04233 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
CD74P04233 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
CD74P04233 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.08□□□□□ -0.32
CD74P04233 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.08□□□□□ -0.32
CD74P04233 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.08□□□□□ -0.32
CD74P04233 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CD74P04233 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.08□□□□□ -0.32
CD74P04233 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CD74P04233 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
CD74P04233 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.08□□□□□ -0.32
CD74P04233 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CD74P04233 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CD74P04233 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.08□□□□□ -0.32
CD74P04233 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.08□□□□□ -0.32
CD74P04233 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
CD74P04233 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.08□□□□□ -0.32
CD74P04233 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.08□□□□□ -0.32
CD74P04233 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.08□□□□□ -0.32
CD74P04233 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD74P04233 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CD74P04233 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.07□□□□□ -0.32
CD74P04233 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 AC138969.3-201ENST00000546612 1459 ntBASIC13.07□□□□□ -0.32
CD74P04233 AC138932.2-201ENST00000548268 1459 ntBASIC13.07□□□□□ -0.32
CD74P04233 AC126755.4-201ENST00000549796 1459 ntBASIC13.07□□□□□ -0.32
CD74P04233 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD74P04233 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.07□□□□□ -0.32
CD74P04233 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms