Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LTAP01374 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.73□□□□□ -0.53
LTAP01374 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LTAP01374 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LTAP01374 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LTAP01374 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LTAP01374 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LTAP01374 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.73□□□□□ -0.53
LTAP01374 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.73□□□□□ -0.53
LTAP01374 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.73□□□□□ -0.53
LTAP01374 FAM197Y8-203ENST00000450145 560 ntBASIC11.73□□□□□ -0.53
LTAP01374 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LTAP01374 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.73□□□□□ -0.53
LTAP01374 AC092910.1-201ENST00000482027 1129 ntBASIC11.73□□□□□ -0.53
LTAP01374 RNA5SP410-201ENST00000516285 106 ntBASIC11.73□□□□□ -0.53
LTAP01374 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LTAP01374 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.73□□□□□ -0.53
LTAP01374 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LTAP01374 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.73□□□□□ -0.53
LTAP01374 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
LTAP01374 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.73□□□□□ -0.53
LTAP01374 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.73□□□□□ -0.53
LTAP01374 AL138918.1-201ENST00000568306 659 ntBASIC11.73□□□□□ -0.53
LTAP01374 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LTAP01374 AC018529.2-202ENST00000611482 3087 ntBASIC11.73□□□□□ -0.53
LTAP01374 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
LTAP01374 AL607033.1-201ENST00000623900 1599 ntBASIC11.73□□□□□ -0.53
LTAP01374 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.73□□□□□ -0.53
LTAP01374 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LTAP01374 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LTAP01374 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LTAP01374 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.72□□□□□ -0.53
LTAP01374 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LTAP01374 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LTAP01374 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 KRT18P67-201ENST00000432816 1264 ntBASIC11.72□□□□□ -0.53
LTAP01374 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.72□□□□□ -0.53
LTAP01374 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.72□□□□□ -0.53
LTAP01374 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.72□□□□□ -0.53
LTAP01374 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.72□□□□□ -0.53
LTAP01374 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
LTAP01374 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.72□□□□□ -0.53
LTAP01374 AL031008.1-201ENST00000619963 541 ntBASIC11.72□□□□□ -0.53
LTAP01374 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
LTAP01374 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.72□□□□□ -0.53
LTAP01374 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LTAP01374 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 AP001267.2-201ENST00000532619 2086 ntBASIC11.72□□□□□ -0.53
LTAP01374 AC152010.1-201ENST00000415779 2006 ntBASIC11.72□□□□□ -0.53
LTAP01374 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LTAP01374 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.72□□□□□ -0.53
LTAP01374 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.72□□□□□ -0.53
LTAP01374 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.71□□□□□ -0.53
LTAP01374 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms