Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG5O95196 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CSPG5O95196 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CSPG5O95196 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.26
CSPG5O95196 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CSPG5O95196 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CSPG5O95196 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.7■□□□□ 0.26
CSPG5O95196 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.7■□□□□ 0.26
CSPG5O95196 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CSPG5O95196 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.7■□□□□ 0.26
CSPG5O95196 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.7■□□□□ 0.26
CSPG5O95196 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.7■□□□□ 0.26
CSPG5O95196 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.7■□□□□ 0.26
CSPG5O95196 RNA5SP423-201ENST00000517127 109 ntBASIC16.7■□□□□ 0.26
CSPG5O95196 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CSPG5O95196 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 AC008687.7-202ENST00000637404 953 ntBASIC16.7■□□□□ 0.26
CSPG5O95196 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.7■□□□□ 0.26
CSPG5O95196 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.7■□□□□ 0.26
CSPG5O95196 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.7■□□□□ 0.26
CSPG5O95196 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.7■□□□□ 0.26
CSPG5O95196 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.7■□□□□ 0.26
CSPG5O95196 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.7■□□□□ 0.26
CSPG5O95196 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
CSPG5O95196 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSPG5O95196 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.69■□□□□ 0.26
CSPG5O95196 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.69■□□□□ 0.26
CSPG5O95196 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.69■□□□□ 0.26
CSPG5O95196 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.69■□□□□ 0.26
CSPG5O95196 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 AC092506.1-202ENST00000401022 528 ntBASIC16.69■□□□□ 0.26
CSPG5O95196 MIR1202-201ENST00000408529 83 ntBASIC16.69■□□□□ 0.26
CSPG5O95196 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 AC023310.1-201ENST00000554836 735 ntBASIC16.69■□□□□ 0.26
CSPG5O95196 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
CSPG5O95196 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.69■□□□□ 0.26
CSPG5O95196 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.69■□□□□ 0.26
CSPG5O95196 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.69■□□□□ 0.26
CSPG5O95196 AC005695.3-201ENST00000614522 232 ntBASIC16.69■□□□□ 0.26
CSPG5O95196 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.69■□□□□ 0.26
CSPG5O95196 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CSPG5O95196 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.69■□□□□ 0.26
CSPG5O95196 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CSPG5O95196 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.69■□□□□ 0.26
CSPG5O95196 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CSPG5O95196 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CSPG5O95196 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CSPG5O95196 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.69■□□□□ 0.26
CSPG5O95196 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSPG5O95196 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.69■□□□□ 0.26
CSPG5O95196 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.69■□□□□ 0.26
CSPG5O95196 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms