Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SLC28A2O43868 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A2O43868 AL365209.1-201ENST00000624418 6473 ntBASIC15.05■□□□□ -0
SLC28A2O43868 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 AC011477.6-201ENST00000604980 1927 ntBASIC15.04■□□□□ -0
SLC28A2O43868 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 AP001282.1-201ENST00000531301 1499 ntBASIC15.04■□□□□ -0
SLC28A2O43868 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
SLC28A2O43868 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.04■□□□□ -0
SLC28A2O43868 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.04■□□□□ -0
SLC28A2O43868 GOLGA2P4-201ENST00000441462 777 ntBASIC15.04■□□□□ -0
SLC28A2O43868 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.04■□□□□ -0
SLC28A2O43868 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.04■□□□□ -0
SLC28A2O43868 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A2O43868 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
SLC28A2O43868 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.04■□□□□ -0
SLC28A2O43868 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A2O43868 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SLC28A2O43868 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SLC28A2O43868 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.03■□□□□ -0
SLC28A2O43868 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.03■□□□□ -0
SLC28A2O43868 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SLC28A2O43868 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A2O43868 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 ANKRD19P-201ENST00000338192 862 ntBASIC15.03■□□□□ -0
SLC28A2O43868 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.03■□□□□ -0
SLC28A2O43868 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SLC28A2O43868 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A2O43868 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.03■□□□□ -0
SLC28A2O43868 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
SLC28A2O43868 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.03■□□□□ -0
SLC28A2O43868 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC28A2O43868 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.03■□□□□ -0
SLC28A2O43868 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.03■□□□□ -0
SLC28A2O43868 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.03■□□□□ -0
SLC28A2O43868 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A2O43868 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.03■□□□□ -0
SLC28A2O43868 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A2O43868 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.03■□□□□ -0
SLC28A2O43868 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A2O43868 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.03■□□□□ -0
SLC28A2O43868 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A2O43868 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A2O43868 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A2O43868 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms