Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN1O15353 FAM197Y7-201ENST00000432892 766 ntBASIC18.49■□□□□ 0.55
FOXN1O15353 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXN1O15353 AC125604.1-201ENST00000496255 707 ntBASIC18.49■□□□□ 0.55
FOXN1O15353 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.49■□□□□ 0.55
FOXN1O15353 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.49■□□□□ 0.55
FOXN1O15353 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.49■□□□□ 0.55
FOXN1O15353 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.49■□□□□ 0.55
FOXN1O15353 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.49■□□□□ 0.55
FOXN1O15353 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.49■□□□□ 0.55
FOXN1O15353 AC073352.2-201ENST00000609385 439 ntBASIC18.49■□□□□ 0.55
FOXN1O15353 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.49■□□□□ 0.55
FOXN1O15353 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXN1O15353 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN1O15353 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN1O15353 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN1O15353 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.48■□□□□ 0.55
FOXN1O15353 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXN1O15353 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN1O15353 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN1O15353 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
FOXN1O15353 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXN1O15353 FO393414.2-201ENST00000405153 598 ntBASIC18.48■□□□□ 0.55
FOXN1O15353 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN1O15353 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN1O15353 RN7SL11P-201ENST00000471305 293 ntBASIC18.48■□□□□ 0.55
FOXN1O15353 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXN1O15353 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
FOXN1O15353 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXN1O15353 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.48■□□□□ 0.55
FOXN1O15353 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
FOXN1O15353 AC138649.2-201ENST00000615886 705 ntBASIC18.48■□□□□ 0.55
FOXN1O15353 AC145423.3-201ENST00000615987 467 ntBASIC18.48■□□□□ 0.55
FOXN1O15353 AC138951.2-201ENST00000623455 1161 ntBASIC18.48■□□□□ 0.55
FOXN1O15353 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
FOXN1O15353 Z97205.2-201ENST00000564697 1639 ntBASIC18.48■□□□□ 0.55
FOXN1O15353 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
FOXN1O15353 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN1O15353 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN1O15353 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
FOXN1O15353 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
FOXN1O15353 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
FOXN1O15353 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN1O15353 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN1O15353 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXN1O15353 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN1O15353 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXN1O15353 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXN1O15353 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
FOXN1O15353 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
FOXN1O15353 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
FOXN1O15353 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 AC112504.1-201ENST00000623415 1841 ntBASIC18.47■□□□□ 0.55
FOXN1O15353 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
FOXN1O15353 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXN1O15353 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXN1O15353 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.47■□□□□ 0.55
FOXN1O15353 POM121L10P-201ENST00000436994 1285 ntBASIC18.47■□□□□ 0.55
FOXN1O15353 Z97180.1-201ENST00000445173 988 ntBASIC18.47■□□□□ 0.55
FOXN1O15353 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.47■□□□□ 0.55
FOXN1O15353 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
FOXN1O15353 AC025279.2-201ENST00000569730 653 ntBASIC18.47■□□□□ 0.55
FOXN1O15353 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
FOXN1O15353 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.47■□□□□ 0.55
FOXN1O15353 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 AP001527.2-201ENST00000614441 631 ntBASIC18.47■□□□□ 0.55
FOXN1O15353 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
FOXN1O15353 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
FOXN1O15353 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXN1O15353 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXN1O15353 LINC02447-202ENST00000501888 2146 ntBASIC18.47■□□□□ 0.55
FOXN1O15353 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
FOXN1O15353 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXN1O15353 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
FOXN1O15353 PRAL-201ENST00000624952 3286 ntBASIC18.47■□□□□ 0.55
FOXN1O15353 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms