Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 KRT90P-201ENST00000549264 1064 ntBASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AC022188.1-201ENST00000620960 1664 ntBASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.5■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 LINC02199-201ENST00000506655 2702 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 RNU1-114P-201ENST00000365297 166 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 ACTBP8-201ENST00000403258 1108 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 KLF2P2-201ENST00000416807 1039 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 BNIP3P42-201ENST00000454982 569 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 BNIP3P29-201ENST00000598302 571 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AC011447.5-201ENST00000616168 564 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 RHOXF1P1-202ENST00000635473 501 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 CICP13-201ENST00000422015 2789 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 DOC2GP-204ENST00000639052 2548 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 TNRC18P3-201ENST00000441896 2691 ntBASIC15.49■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AC093525.8-201ENST00000624099 1342 ntBASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 FAM21FP-201ENST00000426241 1131 ntBASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 HLA-V-201ENST00000429037 534 ntBASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 AC025279.2-201ENST00000569730 653 ntBASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 GNRHR2-203ENST00000581100 1187 ntBASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.48■□□□□ 0.07
C1QTNF3-AMACRE9PGA6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms