Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AC022494.1-201ENST00000466044 728 ntBASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 KRT90P-201ENST00000549264 1064 ntBASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 GNRHR2-203ENST00000581100 1187 ntBASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AC010328.2-201ENST00000597698 1111 ntBASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 KRT8P35-201ENST00000483942 1338 ntBASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TBC1D3FA6NER0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 AL391005.1-201ENST00000623953 2435 ntBASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 AC026954.1-201ENST00000429771 1293 ntBASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 AL355994.2-201ENST00000447882 704 ntBASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 AC025279.2-201ENST00000569730 653 ntBASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 MIR4538-201ENST00000581377 78 ntBASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TBC1D3FA6NER0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms