Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 RPS2P28-201ENST00000314255 741 ntBASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 RNA5SP410-201ENST00000516285 106 ntBASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 UNC93B6-202ENST00000528242 690 ntBASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 LINC01711-201ENST00000598340 967 ntBASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 REXO1L4P-201ENST00000605109 1937 ntBASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 KRT18P21-201ENST00000515767 1272 ntBASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.53□□□□□ -0.08
TCRBV3S1A0A5B6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.52□□□□□ -0.08
TCRBV3S1A0A5B6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms