Protein–RNA interactions for Protein: Q9Y4A5

TRRAP, Transformation/transcription domain-associated protein, humanhuman

Predictions only

Length 3,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAPQ9Y4A5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRRAPQ9Y4A5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRRAPQ9Y4A5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRRAPQ9Y4A5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRRAPQ9Y4A5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.91■□□□□ 0.46
TRRAPQ9Y4A5 AC027682.1-201ENST00000562846 899 ntBASIC17.91■□□□□ 0.46
TRRAPQ9Y4A5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.91■□□□□ 0.46
TRRAPQ9Y4A5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRRAPQ9Y4A5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRRAPQ9Y4A5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TRRAPQ9Y4A5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.9■□□□□ 0.46
TRRAPQ9Y4A5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRRAPQ9Y4A5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.9■□□□□ 0.46
TRRAPQ9Y4A5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.9■□□□□ 0.46
TRRAPQ9Y4A5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRRAPQ9Y4A5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRRAPQ9Y4A5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.89■□□□□ 0.45
TRRAPQ9Y4A5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
TRRAPQ9Y4A5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRRAPQ9Y4A5 SLC47A1P1-202ENST00000449666 945 ntBASIC17.89■□□□□ 0.45
TRRAPQ9Y4A5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRRAPQ9Y4A5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRRAPQ9Y4A5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.88■□□□□ 0.45
TRRAPQ9Y4A5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRRAPQ9Y4A5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRRAPQ9Y4A5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRRAPQ9Y4A5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.88■□□□□ 0.45
TRRAPQ9Y4A5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.88■□□□□ 0.45
TRRAPQ9Y4A5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.87■□□□□ 0.45
TRRAPQ9Y4A5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.87■□□□□ 0.45
TRRAPQ9Y4A5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.87■□□□□ 0.45
TRRAPQ9Y4A5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRRAPQ9Y4A5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.87■□□□□ 0.45
TRRAPQ9Y4A5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.87■□□□□ 0.45
TRRAPQ9Y4A5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.87■□□□□ 0.45
TRRAPQ9Y4A5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
TRRAPQ9Y4A5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 YBX1P1-201ENST00000445822 960 ntBASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 AP004609.3-201ENST00000610705 1884 ntBASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 RAP2CP1-201ENST00000605103 478 ntBASIC17.86■□□□□ 0.45
TRRAPQ9Y4A5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 DUX4L19-201ENST00000557448 1267 ntBASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRRAPQ9Y4A5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.84■□□□□ 0.45
TRRAPQ9Y4A5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRRAPQ9Y4A5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.83■□□□□ 0.45
TRRAPQ9Y4A5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
TRRAPQ9Y4A5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRRAPQ9Y4A5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 DUX4L2-201ENST00000561772 1275 ntBASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 DUX4L6-201ENST00000626483 1275 ntBASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 DUX4L1-201ENST00000627662 1275 ntBASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 DUX4L8-201ENST00000629013 1275 ntBASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 DUX4L3-201ENST00000630187 1275 ntBASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 DUX4L7-201ENST00000630678 1275 ntBASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 DUX4L5-201ENST00000630834 1275 ntBASIC17.83■□□□□ 0.44
TRRAPQ9Y4A5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRRAPQ9Y4A5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRRAPQ9Y4A5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRRAPQ9Y4A5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.82■□□□□ 0.44
TRRAPQ9Y4A5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.82■□□□□ 0.44
TRRAPQ9Y4A5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRRAPQ9Y4A5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRRAPQ9Y4A5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms