Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PPP4R1Q8TF05 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R1Q8TF05 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R1Q8TF05 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R1Q8TF05 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R1Q8TF05 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R1Q8TF05 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R1Q8TF05 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PPP4R1Q8TF05 DUSP8P5-201ENST00000422884 1815 ntBASIC23.12■■□□□ 1.29
PPP4R1Q8TF05 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPP4R1Q8TF05 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.12■■□□□ 1.29
PPP4R1Q8TF05 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.12■■□□□ 1.29
PPP4R1Q8TF05 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.12■■□□□ 1.29
PPP4R1Q8TF05 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.12■■□□□ 1.29
PPP4R1Q8TF05 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PPP4R1Q8TF05 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PPP4R1Q8TF05 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.12■■□□□ 1.29
PPP4R1Q8TF05 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PPP4R1Q8TF05 AC093536.1-201ENST00000569153 554 ntBASIC23.11■■□□□ 1.29
PPP4R1Q8TF05 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R1Q8TF05 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PPP4R1Q8TF05 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R1Q8TF05 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PPP4R1Q8TF05 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R1Q8TF05 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PPP4R1Q8TF05 KRT18P60-201ENST00000312876 1297 ntBASIC23.1■■□□□ 1.29
PPP4R1Q8TF05 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.1■■□□□ 1.29
PPP4R1Q8TF05 AC004812.2-201ENST00000611079 2094 ntBASIC23.1■■□□□ 1.29
PPP4R1Q8TF05 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.1■■□□□ 1.29
PPP4R1Q8TF05 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R1Q8TF05 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R1Q8TF05 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R1Q8TF05 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R1Q8TF05 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PPP4R1Q8TF05 TSPY13P-201ENST00000338964 914 ntBASIC23.09■■□□□ 1.29
PPP4R1Q8TF05 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.09■■□□□ 1.29
PPP4R1Q8TF05 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
PPP4R1Q8TF05 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PPP4R1Q8TF05 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
PPP4R1Q8TF05 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PPP4R1Q8TF05 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
PPP4R1Q8TF05 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
PPP4R1Q8TF05 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R1Q8TF05 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PPP4R1Q8TF05 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.08■■□□□ 1.29
PPP4R1Q8TF05 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.08■■□□□ 1.29
PPP4R1Q8TF05 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.08■■□□□ 1.29
PPP4R1Q8TF05 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.08■■□□□ 1.28
PPP4R1Q8TF05 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R1Q8TF05 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R1Q8TF05 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R1Q8TF05 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PPP4R1Q8TF05 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R1Q8TF05 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.07■■□□□ 1.28
PPP4R1Q8TF05 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R1Q8TF05 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PPP4R1Q8TF05 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 MIR6089-201ENST00000616698 64 ntBASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.06■■□□□ 1.28
PPP4R1Q8TF05 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPP4R1Q8TF05 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PPP4R1Q8TF05 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.05■■□□□ 1.28
PPP4R1Q8TF05 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPP4R1Q8TF05 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PPP4R1Q8TF05 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PPP4R1Q8TF05 AC004987.1-201ENST00000428627 508 ntBASIC23.05■■□□□ 1.28
PPP4R1Q8TF05 ATP5G2P3-201ENST00000429083 425 ntBASIC23.05■■□□□ 1.28
PPP4R1Q8TF05 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPP4R1Q8TF05 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PPP4R1Q8TF05 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PPP4R1Q8TF05 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PPP4R1Q8TF05 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.04■■□□□ 1.28
PPP4R1Q8TF05 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.04■■□□□ 1.28
PPP4R1Q8TF05 AC007029.1-201ENST00000604183 313 ntBASIC23.04■■□□□ 1.28
PPP4R1Q8TF05 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PPP4R1Q8TF05 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PPP4R1Q8TF05 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.04■■□□□ 1.28
PPP4R1Q8TF05 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 ABCB10P4-201ENST00000566803 2184 ntBASIC23.03■■□□□ 1.28
PPP4R1Q8TF05 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R1Q8TF05 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.02■■□□□ 1.28
PPP4R1Q8TF05 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PPP4R1Q8TF05 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms