Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.74■□□□□ 0.75
Prpf18Q8BM39 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Prpf18Q8BM39 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf18Q8BM39 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf18Q8BM39 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf18Q8BM39 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf18Q8BM39 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf18Q8BM39 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Prpf18Q8BM39 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf18Q8BM39 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf18Q8BM39 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf18Q8BM39 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.72■□□□□ 0.75
Prpf18Q8BM39 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf18Q8BM39 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf18Q8BM39 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf18Q8BM39 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Prpf18Q8BM39 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf18Q8BM39 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf18Q8BM39 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf18Q8BM39 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf18Q8BM39 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.71■□□□□ 0.75
Prpf18Q8BM39 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf18Q8BM39 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.71■□□□□ 0.75
Prpf18Q8BM39 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf18Q8BM39 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf18Q8BM39 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf18Q8BM39 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Prpf18Q8BM39 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Prpf18Q8BM39 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf18Q8BM39 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf18Q8BM39 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Prpf18Q8BM39 Gm11175-201ENSMUST00000116172 543 ntBASIC19.7■□□□□ 0.74
Prpf18Q8BM39 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf18Q8BM39 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf18Q8BM39 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Prpf18Q8BM39 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf18Q8BM39 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf18Q8BM39 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Prpf18Q8BM39 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf18Q8BM39 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf18Q8BM39 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.69■□□□□ 0.74
Prpf18Q8BM39 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf18Q8BM39 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf18Q8BM39 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf18Q8BM39 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf18Q8BM39 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf18Q8BM39 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.68■□□□□ 0.74
Prpf18Q8BM39 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Prpf18Q8BM39 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf18Q8BM39 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf18Q8BM39 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf18Q8BM39 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf18Q8BM39 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf18Q8BM39 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf18Q8BM39 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf18Q8BM39 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf18Q8BM39 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Prpf18Q8BM39 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf18Q8BM39 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf18Q8BM39 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf18Q8BM39 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf18Q8BM39 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf18Q8BM39 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf18Q8BM39 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Prpf18Q8BM39 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf18Q8BM39 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf18Q8BM39 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Prpf18Q8BM39 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf18Q8BM39 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.64■□□□□ 0.73
Prpf18Q8BM39 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf18Q8BM39 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf18Q8BM39 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf18Q8BM39 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf18Q8BM39 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Prpf18Q8BM39 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.63■□□□□ 0.73
Prpf18Q8BM39 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.63■□□□□ 0.73
Prpf18Q8BM39 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf18Q8BM39 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Prpf18Q8BM39 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.63■□□□□ 0.73
Prpf18Q8BM39 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf18Q8BM39 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf18Q8BM39 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf18Q8BM39 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf18Q8BM39 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf18Q8BM39 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf18Q8BM39 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.62■□□□□ 0.73
Prpf18Q8BM39 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf18Q8BM39 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Prpf18Q8BM39 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms