Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AC006970.2-201ENST00000450065 779 ntBASIC12.74□□□□□ -0.37
RNF213Q63HN8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF213Q63HN8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
RNF213Q63HN8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.74□□□□□ -0.37
RNF213Q63HN8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RNF213Q63HN8 AL109923.1-201ENST00000618799 583 ntBASIC12.74□□□□□ -0.37
RNF213Q63HN8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RNF213Q63HN8 MIR1224-201ENST00000408193 85 ntBASIC12.74□□□□□ -0.37
RNF213Q63HN8 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.74□□□□□ -0.37
RNF213Q63HN8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC12.74□□□□□ -0.37
RNF213Q63HN8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RNF213Q63HN8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.73□□□□□ -0.37
RNF213Q63HN8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC12.73□□□□□ -0.37
RNF213Q63HN8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.73□□□□□ -0.37
RNF213Q63HN8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RNF213Q63HN8 AC142086.2-201ENST00000569753 217 ntBASIC12.73□□□□□ -0.37
RNF213Q63HN8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC12.73□□□□□ -0.37
RNF213Q63HN8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.73□□□□□ -0.37
RNF213Q63HN8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC12.73□□□□□ -0.37
RNF213Q63HN8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC12.73□□□□□ -0.37
RNF213Q63HN8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RNF213Q63HN8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC12.73□□□□□ -0.37
RNF213Q63HN8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RNF213Q63HN8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.73□□□□□ -0.37
RNF213Q63HN8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC12.73□□□□□ -0.37
RNF213Q63HN8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RNF213Q63HN8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF213Q63HN8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC12.72□□□□□ -0.37
RNF213Q63HN8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC12.72□□□□□ -0.37
RNF213Q63HN8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RNF213Q63HN8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.72□□□□□ -0.37
RNF213Q63HN8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC12.72□□□□□ -0.37
RNF213Q63HN8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RNF213Q63HN8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RNF213Q63HN8 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.72□□□□□ -0.37
RNF213Q63HN8 KRT18P61-201ENST00000585825 1298 ntBASIC12.72□□□□□ -0.37
RNF213Q63HN8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.72□□□□□ -0.37
RNF213Q63HN8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RNF213Q63HN8 AL596275.1-201ENST00000423464 877 ntBASIC12.71□□□□□ -0.37
RNF213Q63HN8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RNF213Q63HN8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC12.71□□□□□ -0.38
RNF213Q63HN8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RNF213Q63HN8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF213Q63HN8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC12.7□□□□□ -0.38
RNF213Q63HN8 AP004833.2-201ENST00000532228 1454 ntBASIC12.7□□□□□ -0.38
RNF213Q63HN8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RNF213Q63HN8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF213Q63HN8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RNF213Q63HN8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF213Q63HN8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF213Q63HN8 PTCHD3P2-201ENST00000424937 1205 ntBASIC12.7□□□□□ -0.38
RNF213Q63HN8 GUSBP6-202ENST00000438529 1198 ntBASIC12.7□□□□□ -0.38
RNF213Q63HN8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.7□□□□□ -0.38
RNF213Q63HN8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RNF213Q63HN8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF213Q63HN8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RNF213Q63HN8 CCDC92B-201ENST00000575506 885 ntBASIC12.7□□□□□ -0.38
RNF213Q63HN8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.7□□□□□ -0.38
RNF213Q63HN8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC12.69□□□□□ -0.38
RNF213Q63HN8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.69□□□□□ -0.38
RNF213Q63HN8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF213Q63HN8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF213Q63HN8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF213Q63HN8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC12.69□□□□□ -0.38
RNF213Q63HN8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF213Q63HN8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF213Q63HN8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.69□□□□□ -0.38
RNF213Q63HN8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF213Q63HN8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.68□□□□□ -0.38
RNF213Q63HN8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF213Q63HN8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF213Q63HN8 TSPY26P-201ENST00000476365 1326 ntBASIC12.68□□□□□ -0.38
RNF213Q63HN8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF213Q63HN8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.68□□□□□ -0.38
RNF213Q63HN8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF213Q63HN8 KRT18P14-201ENST00000534205 1250 ntBASIC12.68□□□□□ -0.38
RNF213Q63HN8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
RNF213Q63HN8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF213Q63HN8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC12.68□□□□□ -0.38
RNF213Q63HN8 AC136469.2-201ENST00000623944 1028 ntBASIC12.68□□□□□ -0.38
RNF213Q63HN8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RNF213Q63HN8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.67□□□□□ -0.38
RNF213Q63HN8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC12.67□□□□□ -0.38
RNF213Q63HN8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RNF213Q63HN8 TPRG1LP1-201ENST00000598702 760 ntBASIC12.67□□□□□ -0.38
RNF213Q63HN8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RNF213Q63HN8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RNF213Q63HN8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.67□□□□□ -0.38
RNF213Q63HN8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RNF213Q63HN8 SNX5-217ENST00000606557 1087 ntBASIC12.67□□□□□ -0.38
RNF213Q63HN8 AC011298.3-201ENST00000615796 283 ntBASIC12.67□□□□□ -0.38
RNF213Q63HN8 GAS2L1P2-201ENST00000436355 1356 ntBASIC12.67□□□□□ -0.38
RNF213Q63HN8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
RNF213Q63HN8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RNF213Q63HN8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
RNF213Q63HN8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RNF213Q63HN8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC12.67□□□□□ -0.38
RNF213Q63HN8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RNF213Q63HN8 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.67□□□□□ -0.38
RNF213Q63HN8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms