Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.53■□□□□ 0.4
Foxf1Q61080 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxf1Q61080 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Foxf1Q61080 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxf1Q61080 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxf1Q61080 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxf1Q61080 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxf1Q61080 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Foxf1Q61080 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxf1Q61080 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxf1Q61080 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Foxf1Q61080 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxf1Q61080 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxf1Q61080 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxf1Q61080 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxf1Q61080 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.51■□□□□ 0.39
Foxf1Q61080 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.51■□□□□ 0.39
Foxf1Q61080 Gm43566-201ENSMUST00000196851 808 ntBASIC17.51■□□□□ 0.39
Foxf1Q61080 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.51■□□□□ 0.39
Foxf1Q61080 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxf1Q61080 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Foxf1Q61080 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Foxf1Q61080 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Foxf1Q61080 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxf1Q61080 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxf1Q61080 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxf1Q61080 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxf1Q61080 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Foxf1Q61080 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Foxf1Q61080 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Foxf1Q61080 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxf1Q61080 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxf1Q61080 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Foxf1Q61080 Iqck-206ENSMUST00000208658 2891 ntBASIC17.48■□□□□ 0.39
Foxf1Q61080 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxf1Q61080 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Foxf1Q61080 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Foxf1Q61080 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.48■□□□□ 0.39
Foxf1Q61080 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxf1Q61080 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxf1Q61080 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.47■□□□□ 0.39
Foxf1Q61080 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.47■□□□□ 0.39
Foxf1Q61080 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxf1Q61080 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxf1Q61080 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxf1Q61080 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxf1Q61080 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.47■□□□□ 0.39
Foxf1Q61080 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.47■□□□□ 0.39
Foxf1Q61080 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxf1Q61080 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxf1Q61080 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxf1Q61080 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.46■□□□□ 0.39
Foxf1Q61080 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxf1Q61080 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.46■□□□□ 0.39
Foxf1Q61080 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.46■□□□□ 0.39
Foxf1Q61080 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxf1Q61080 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Foxf1Q61080 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Foxf1Q61080 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxf1Q61080 Gm13238-201ENSMUST00000117655 780 ntBASIC17.45■□□□□ 0.38
Foxf1Q61080 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.45■□□□□ 0.38
Foxf1Q61080 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Foxf1Q61080 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxf1Q61080 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.45■□□□□ 0.38
Foxf1Q61080 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Foxf1Q61080 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.45■□□□□ 0.38
Foxf1Q61080 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Foxf1Q61080 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxf1Q61080 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxf1Q61080 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxf1Q61080 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Foxf1Q61080 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxf1Q61080 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Foxf1Q61080 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Foxf1Q61080 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.44■□□□□ 0.38
Foxf1Q61080 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxf1Q61080 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Foxf1Q61080 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxf1Q61080 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxf1Q61080 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Foxf1Q61080 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxf1Q61080 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxf1Q61080 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Foxf1Q61080 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Foxf1Q61080 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.44■□□□□ 0.38
Foxf1Q61080 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Foxf1Q61080 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Foxf1Q61080 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxf1Q61080 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxf1Q61080 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxf1Q61080 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Foxf1Q61080 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxf1Q61080 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Foxf1Q61080 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Foxf1Q61080 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Foxf1Q61080 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Foxf1Q61080 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Foxf1Q61080 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Foxf1Q61080 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.42■□□□□ 0.38
Foxf1Q61080 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms