Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 YLR345WYLR345W 1530 nt7.01□□□□□ -1.29
UFD2P54860 KCH1YJR054W 1494 nt7□□□□□ -1.29
UFD2P54860 GPA2YER020W 1350 nt7□□□□□ -1.29
UFD2P54860 SLD2YKL108W 1362 nt7□□□□□ -1.29
UFD2P54860 YML133CYML133C 4125 nt7□□□□□ -1.29
UFD2P54860 PTC1YDL006W 846 nt7□□□□□ -1.29
UFD2P54860 HPM1YIL110W 1134 nt7□□□□□ -1.29
UFD2P54860 CTK2YJL006C 972 nt7□□□□□ -1.29
UFD2P54860 EBP2YKL172W 1284 nt7□□□□□ -1.29
UFD2P54860 RPS31YLR167W 459 nt7□□□□□ -1.29
UFD2P54860 ORM2YLR350W 651 nt7□□□□□ -1.29
UFD2P54860 VPS20YMR077C 666 nt7□□□□□ -1.29
UFD2P54860 YOR200WYOR200W 399 nt7□□□□□ -1.29
UFD2P54860 WHI2YOR043W 1461 nt6.99□□□□□ -1.29
UFD2P54860 BNA5YLR231C 1362 nt6.99□□□□□ -1.29
UFD2P54860 YEL068CYEL068C 333 nt6.99□□□□□ -1.29
UFD2P54860 RHO3YIL118W 696 nt6.99□□□□□ -1.29
UFD2P54860 YIR042CYIR042C 711 nt6.99□□□□□ -1.29
UFD2P54860 ERG20YJL167W 1059 nt6.99□□□□□ -1.29
UFD2P54860 MSN2YMR037C 2115 nt6.99□□□□□ -1.29
UFD2P54860 YIM2YMR151W 438 nt6.99□□□□□ -1.29
UFD2P54860 PGA2YNL149C 390 nt6.99□□□□□ -1.29
UFD2P54860 MRPS16YPL013C 366 nt6.99□□□□□ -1.29
UFD2P54860 YPL191CYPL191C 1083 nt6.99□□□□□ -1.29
UFD2P54860 YDR034C-CYDR034C-C 1317 nt6.99□□□□□ -1.29
UFD2P54860 YLR410W-AYLR410W-A 1317 nt6.99□□□□□ -1.29
UFD2P54860 MNS1YJR131W 1650 nt6.98□□□□□ -1.29
UFD2P54860 YCR100CYCR100C 951 nt6.98□□□□□ -1.29
UFD2P54860 VPS61YDR136C 573 nt6.98□□□□□ -1.29
UFD2P54860 YGR204C-AYGR204C-A 114 nt6.98□□□□□ -1.29
UFD2P54860 COA1YIL157C 594 nt6.98□□□□□ -1.29
UFD2P54860 RSM26YJR101W 801 nt6.98□□□□□ -1.29
UFD2P54860 TSA1YML028W 591 nt6.98□□□□□ -1.29
UFD2P54860 ATG16YMR159C 453 nt6.98□□□□□ -1.29
UFD2P54860 YNL042W-BYNL042W-B 258 nt6.98□□□□□ -1.29
UFD2P54860 TFG1YGR186W 2208 nt6.98□□□□□ -1.29
UFD2P54860 COQ6YGR255C 1440 nt6.98□□□□□ -1.29
UFD2P54860 CAF16YFL028C 870 nt6.97□□□□□ -1.29
UFD2P54860 YIR021W-AYIR021W-A 213 nt6.97□□□□□ -1.29
UFD2P54860 HMS2YJR147W 1077 nt6.97□□□□□ -1.29
UFD2P54860 SEN34YAR008W 828 nt6.97□□□□□ -1.29
UFD2P54860 RUF5-1RUF5-1 710 nt6.97□□□□□ -1.29
UFD2P54860 RUF5-2RUF5-2 710 nt6.97□□□□□ -1.29
UFD2P54860 CKB2YOR039W 777 nt6.97□□□□□ -1.29
UFD2P54860 MAL13YGR288W 1422 nt6.96□□□□□ -1.3
UFD2P54860 UBC6YER100W 753 nt6.96□□□□□ -1.3
UFD2P54860 Q0142Q0142 177 nt6.96□□□□□ -1.3
UFD2P54860 MRT4YKL009W 711 nt6.96□□□□□ -1.3
UFD2P54860 YMR119W-AYMR119W-A 375 nt6.96□□□□□ -1.3
UFD2P54860 MCT1YOR221C 1083 nt6.96□□□□□ -1.3
UFD2P54860 SMA1YPL027W 738 nt6.96□□□□□ -1.3
UFD2P54860 ARL3YPL051W 597 nt6.96□□□□□ -1.3
UFD2P54860 MUP3YHL036W 1641 nt6.96□□□□□ -1.3
UFD2P54860 ADE12YNL220W 1302 nt6.96□□□□□ -1.3
UFD2P54860 DRN1YGR093W 1524 nt6.96□□□□□ -1.3
UFD2P54860 PRP19YLL036C 1512 nt6.96□□□□□ -1.3
UFD2P54860 YFR006WYFR006W 1608 nt6.95□□□□□ -1.3
UFD2P54860 FMP48YGR052W 1110 nt6.95□□□□□ -1.3
UFD2P54860 GMH1YKR030W 822 nt6.95□□□□□ -1.3
UFD2P54860 YLR326WYLR326W 723 nt6.95□□□□□ -1.3
UFD2P54860 AIM33YML087C 939 nt6.95□□□□□ -1.3
UFD2P54860 YNL217WYNL217W 981 nt6.95□□□□□ -1.3
UFD2P54860 YPR114WYPR114W 948 nt6.95□□□□□ -1.3
UFD2P54860 ANT1YPR128C 987 nt6.95□□□□□ -1.3
UFD2P54860 RRP15YPR143W 753 nt6.95□□□□□ -1.3
UFD2P54860 GUD1YDL238C 1470 nt6.95□□□□□ -1.3
UFD2P54860 CUS1YMR240C 1311 nt6.95□□□□□ -1.3
UFD2P54860 NUF2YOL069W 1356 nt6.95□□□□□ -1.3
UFD2P54860 YOS9YDR057W 1629 nt6.94□□□□□ -1.3
UFD2P54860 GPA1YHR005C 1419 nt6.94□□□□□ -1.3
UFD2P54860 TOS2YGR221C 1869 nt6.94□□□□□ -1.3
UFD2P54860 RAD7YJR052W 1698 nt6.94□□□□□ -1.3
UFD2P54860 YDR278CYDR278C 318 nt6.94□□□□□ -1.3
UFD2P54860 PRS2YER099C 957 nt6.94□□□□□ -1.3
UFD2P54860 YFL012WYFL012W 447 nt6.94□□□□□ -1.3
UFD2P54860 DID4YKL002W 699 nt6.94□□□□□ -1.3
UFD2P54860 YLR126CYLR126C 756 nt6.94□□□□□ -1.3
UFD2P54860 MRPL15YLR312W-A 762 nt6.94□□□□□ -1.3
UFD2P54860 TOM40YMR203W 1164 nt6.94□□□□□ -1.3
UFD2P54860 CBP6YBR120C 489 nt6.94□□□□□ -1.3
UFD2P54860 SLX5YDL013W 1860 nt6.94□□□□□ -1.3
UFD2P54860 YHR137C-AYHR137C-A 651 nt6.93□□□□□ -1.3
UFD2P54860 POL32YJR043C 1053 nt6.93□□□□□ -1.3
UFD2P54860 DAN1YJR150C 897 nt6.93□□□□□ -1.3
UFD2P54860 ECM1YAL059W 639 nt6.93□□□□□ -1.3
UFD2P54860 CIN4YMR138W 576 nt6.93□□□□□ -1.3
UFD2P54860 YOR097CYOR097C 528 nt6.93□□□□□ -1.3
UFD2P54860 YOR169CYOR169C 465 nt6.93□□□□□ -1.3
UFD2P54860 YPL113CYPL113C 1191 nt6.93□□□□□ -1.3
UFD2P54860 POP4YBR257W 840 nt6.93□□□□□ -1.3
UFD2P54860 FRE7YOL152W 1863 nt6.93□□□□□ -1.3
UFD2P54860 HSE1YHL002W 1359 nt6.93□□□□□ -1.3
UFD2P54860 PHO3YBR092C 1404 nt6.93□□□□□ -1.3
UFD2P54860 AIM6YDL237W 1173 nt6.92□□□□□ -1.3
UFD2P54860 COX20YDR231C 618 nt6.92□□□□□ -1.3
UFD2P54860 YER134CYER134C 537 nt6.92□□□□□ -1.3
UFD2P54860 tR(ACG)DtR(ACG)D 73 nt6.92□□□□□ -1.3
UFD2P54860 tR(ACG)EtR(ACG)E 73 nt6.92□□□□□ -1.3
UFD2P54860 tR(ACG)KtR(ACG)K 73 nt6.92□□□□□ -1.3
UFD2P54860 tR(ACG)LtR(ACG)L 73 nt6.92□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms