Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.173e-6■■■□□ 19
XRCC6P12956 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.073e-6■■■□□ 19
XRCC6P12956 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC15.48■□□□□ 0.073e-6■■■□□ 19
XRCC6P12956 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC15.06■□□□□ 01e-6■■■□□ 18.9
XRCC6P12956 AL449266.1-201ENST00000357393 557 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.331e-6■■■□□ 18.9
XRCC6P12956 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.931e-6■■■□□ 18.9
XRCC6P12956 LRRC14-204ENST00000528528 1408 ntTSL 332.9■■■□□ 2.862e-6■■■□□ 18.8
XRCC6P12956 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.379e-8■■■□□ 18.8
XRCC6P12956 DHRS2-203ENST00000432832 834 ntTSL 222.63■■□□□ 1.219e-8■■■□□ 18.8
XRCC6P12956 DHRS2-205ENST00000553896 1352 ntTSL 1 (best)22.61■■□□□ 1.219e-8■■■□□ 18.8
XRCC6P12956 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.152e-6■■■□□ 18.8
XRCC6P12956 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.132e-6■■■□□ 18.8
XRCC6P12956 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.61■■□□□ 1.052e-6■■■□□ 18.8
XRCC6P12956 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 19e-8■■■□□ 18.8
XRCC6P12956 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.879e-8■■■□□ 18.8
XRCC6P12956 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.822e-6■■■□□ 18.8
XRCC6P12956 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.762e-6■■■□□ 18.8
XRCC6P12956 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.55■□□□□ 0.722e-6■■■□□ 18.8
XRCC6P12956 DHRS2-208ENST00000556729 5318 ntTSL 218.92■□□□□ 0.629e-8■■■□□ 18.8
XRCC6P12956 DHRS2-209ENST00000557535 927 ntTSL 518.87■□□□□ 0.619e-8■■■□□ 18.8
XRCC6P12956 DHRS2-207ENST00000556701 3157 ntTSL 1 (best)18.61■□□□□ 0.579e-8■■■□□ 18.8
XRCC6P12956 INTS1-202ENST00000468115 3051 ntTSL 218.54■□□□□ 0.562e-6■■■□□ 18.8
XRCC6P12956 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.552e-6■■■□□ 18.8
XRCC6P12956 PLK1-209ENST00000570220 910 ntTSL 318.08■□□□□ 0.482e-6■■■□□ 18.8
XRCC6P12956 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.472e-6■■■□□ 18.8
XRCC6P12956 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.461e-6■■■□□ 18.8
XRCC6P12956 PLK1-204ENST00000564202 584 ntTSL 317.52■□□□□ 0.42e-6■■■□□ 18.8
XRCC6P12956 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.382e-6■■■□□ 18.8
XRCC6P12956 MAP4-212ENST00000468075 487 ntTSL 517.23■□□□□ 0.352e-6■■■□□ 18.8
XRCC6P12956 CNOT6L-207ENST00000515441 572 ntTSL 416.68■□□□□ 0.262e-6■■■□□ 18.8
XRCC6P12956 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.222e-6■■■□□ 18.8
XRCC6P12956 TJP2-211ENST00000636247 3725 ntTSL 1 (best)16.37■□□□□ 0.212e-6■■■□□ 18.8
XRCC6P12956 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)16.34■□□□□ 0.212e-6■■■□□ 18.8
XRCC6P12956 DHRS2-204ENST00000553600 844 ntTSL 216.3■□□□□ 0.29e-8■■■□□ 18.8
XRCC6P12956 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.11■□□□□ 0.172e-6■■■□□ 18.8
XRCC6P12956 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.162e-6■■■□□ 18.8
XRCC6P12956 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.072e-6■■■□□ 18.8
XRCC6P12956 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.072e-6■■■□□ 18.8
XRCC6P12956 CBFA2T3-210ENST00000569464 1327 ntTSL 1 (best)15.41■□□□□ 0.062e-6■■■□□ 18.8
XRCC6P12956 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.022e-6■■■□□ 18.8
XRCC6P12956 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.022e-6■■■□□ 18.8
XRCC6P12956 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC14.91□□□□□ -0.022e-6■■■□□ 18.8
XRCC6P12956 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.031e-6■■■□□ 18.8
XRCC6P12956 PLK1-202ENST00000562272 4135 ntTSL 214.17□□□□□ -0.142e-6■■■□□ 18.8
XRCC6P12956 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC13.6□□□□□ -0.232e-6■■■□□ 18.8
XRCC6P12956 TRIM27-205ENST00000481474 7006 ntTSL 1 (best)13.43□□□□□ -0.262e-6■■■□□ 18.8
XRCC6P12956 CNOT6L-204ENST00000506166 781 ntTSL 212.05□□□□□ -0.482e-6■■■□□ 18.8
XRCC6P12956 TRIM27-203ENST00000414543 1813 ntTSL 311.67□□□□□ -0.542e-6■■■□□ 18.8
XRCC6P12956 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.681e-6■■■□□ 18.8
XRCC6P12956 MAP4-206ENST00000423088 899 ntTSL 39.87□□□□□ -0.832e-6■■■□□ 18.8
XRCC6P12956 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC9.54□□□□□ -0.882e-6■■■□□ 18.8
XRCC6P12956 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.922e-6■■■□□ 18.8
XRCC6P12956 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.942e-6■■■□□ 18.8
XRCC6P12956 ATXN7L3-212ENST00000593073 527 ntTSL 49.07□□□□□ -0.962e-6■■■□□ 18.8
XRCC6P12956 LRRC14-207ENST00000530242 93 ntTSL 39□□□□□ -0.972e-6■■■□□ 18.8
XRCC6P12956 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.83□□□□□ -1.162e-6■■■□□ 18.8
XRCC6P12956 CNOT6L-202ENST00000504804 1925 ntTSL 57.27□□□□□ -1.252e-6■■■□□ 18.8
XRCC6P12956 CNOT6L-206ENST00000512485 1890 ntTSL 56.58□□□□□ -1.362e-6■■■□□ 18.8
XRCC6P12956 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.442e-6■■■□□ 18.8
XRCC6P12956 ARID1A-216ENST00000637465 699 ntTSL 55.48□□□□□ -1.532e-6■■■□□ 18.8
XRCC6P12956 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.772e-6■■■□□ 18.8
XRCC6P12956 MBOAT2-207ENST00000477073 754 ntTSL 324.22■■□□□ 1.475e-6■■■□□ 18.8
XRCC6P12956 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.275e-6■■■□□ 18.8
XRCC6P12956 MBOAT2-203ENST00000462696 580 ntTSL 416.68■□□□□ 0.265e-6■■■□□ 18.8
XRCC6P12956 MBOAT2-209ENST00000486484 1351 ntTSL 24.89□□□□□ -1.635e-6■■■□□ 18.8
XRCC6P12956 MBOAT2-206ENST00000474341 713 ntTSL 54.48□□□□□ -1.695e-6■■■□□ 18.8
XRCC6P12956 MBOAT2-202ENST00000460786 550 ntTSL 32.83□□□□□ -1.965e-6■■■□□ 18.8
XRCC6P12956 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.062e-6■■■□□ 18.7
XRCC6P12956 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC21.02■□□□□ 0.962e-6■■■□□ 18.7
XRCC6P12956 PRRC2C-208ENST00000476522 1931 ntTSL 515.06■□□□□ 04e-8■■■□□ 18.7
XRCC6P12956 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC11.86□□□□□ -0.514e-8■■■□□ 18.7
XRCC6P12956 PRRC2C-206ENST00000467601 717 ntTSL 210.58□□□□□ -0.724e-8■■■□□ 18.7
XRCC6P12956 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.944e-8■■■□□ 18.7
XRCC6P12956 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.24e-8■■■□□ 18.7
XRCC6P12956 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.65■■□□□ 1.384e-6■■■□□ 18.6
XRCC6P12956 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.91■□□□□ 0.784e-6■■■□□ 18.6
XRCC6P12956 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC12.61□□□□□ -0.394e-6■■■□□ 18.6
XRCC6P12956 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.384e-6■■■□□ 18.6
XRCC6P12956 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.434e-6■■■□□ 18.6
XRCC6P12956 ARHGAP5-207ENST00000554090 543 ntTSL 55.75□□□□□ -1.494e-6■■■□□ 18.6
XRCC6P12956 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.794e-6■■■□□ 18.6
XRCC6P12956 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.963e-6■■■□□ 18.5
XRCC6P12956 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.94■□□□□ 0.783e-6■■■□□ 18.5
XRCC6P12956 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.24■□□□□ 0.673e-6■■■□□ 18.5
XRCC6P12956 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.07■□□□□ 0.643e-6■■■□□ 18.5
XRCC6P12956 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.93e-6■■■□□ 18.5
XRCC6P12956 TCF25-207ENST00000562256 1879 ntTSL 1 (best)22.79■■□□□ 1.245e-6■■■□□ 18.5
XRCC6P12956 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC20.62■□□□□ 0.895e-6■■■□□ 18.5
XRCC6P12956 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.855e-6■■■□□ 18.5
XRCC6P12956 TCF25-224ENST00000570116 1947 ntTSL 520.35■□□□□ 0.855e-6■■■□□ 18.5
XRCC6P12956 TCF25-226ENST00000640279 2688 ntTSL 520.02■□□□□ 0.85e-6■■■□□ 18.5
XRCC6P12956 TCF25-206ENST00000562193 627 ntTSL 312.27□□□□□ -0.455e-6■■■□□ 18.5
XRCC6P12956 TANGO2-221ENST00000476940 414 ntTSL 513.97□□□□□ -0.174e-6■■■□□ 18.4
XRCC6P12956 NADK-206ENST00000464373 722 ntTSL 229.36■■■□□ 2.294e-7■■■□□ 18.4
XRCC6P12956 NADK-205ENST00000460602 974 ntTSL 228.97■■■□□ 2.234e-7■■■□□ 18.4
XRCC6P12956 NADK-212ENST00000492768 859 ntTSL 328.97■■■□□ 2.234e-7■■■□□ 18.4
XRCC6P12956 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.514e-7■■■□□ 18.4
XRCC6P12956 TMEM189-205ENST00000453505 2028 ntTSL 1 (best)23.81■■□□□ 1.44e-7■■■□□ 18.4
XRCC6P12956 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.48■■□□□ 1.354e-7■■■□□ 18.4
XRCC6P12956 TMEM189-204ENST00000371658 813 ntTSL 322.95■■□□□ 1.264e-7■■■□□ 18.4
Retrieved 100 of 6,788 protein–RNA pairs in 74.6 ms