Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APOBP04114 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBP04114 HLA-L-209ENST00000420110 1011 ntBASIC14.78□□□□□ -0.04
APOBP04114 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.78□□□□□ -0.04
APOBP04114 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
APOBP04114 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.77□□□□□ -0.04
APOBP04114 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.77□□□□□ -0.05
APOBP04114 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOBP04114 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC14.77□□□□□ -0.05
APOBP04114 KRT18P5-201ENST00000436075 1291 ntBASIC14.77□□□□□ -0.05
APOBP04114 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.77□□□□□ -0.05
APOBP04114 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOBP04114 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.76□□□□□ -0.05
APOBP04114 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOBP04114 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBP04114 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.76□□□□□ -0.05
APOBP04114 AC139426.1-201ENST00000568218 2529 ntBASIC14.76□□□□□ -0.05
APOBP04114 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
APOBP04114 AC006455.2-201ENST00000429931 906 ntBASIC14.76□□□□□ -0.05
APOBP04114 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBP04114 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBP04114 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.76□□□□□ -0.05
APOBP04114 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOBP04114 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOBP04114 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBP04114 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOBP04114 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBP04114 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
APOBP04114 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.75□□□□□ -0.05
APOBP04114 SLC47A1P1-202ENST00000449666 945 ntBASIC14.75□□□□□ -0.05
APOBP04114 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBP04114 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.75□□□□□ -0.05
APOBP04114 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBP04114 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.75□□□□□ -0.05
APOBP04114 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOBP04114 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.74□□□□□ -0.05
APOBP04114 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.74□□□□□ -0.05
APOBP04114 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.74□□□□□ -0.05
APOBP04114 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOBP04114 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOBP04114 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
APOBP04114 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.74□□□□□ -0.05
APOBP04114 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.73□□□□□ -0.05
APOBP04114 AC136469.2-201ENST00000623944 1028 ntBASIC14.73□□□□□ -0.05
APOBP04114 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOBP04114 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
APOBP04114 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC14.73□□□□□ -0.05
APOBP04114 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOBP04114 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.73□□□□□ -0.05
APOBP04114 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
APOBP04114 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOBP04114 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.73□□□□□ -0.05
APOBP04114 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
APOBP04114 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.73□□□□□ -0.05
APOBP04114 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.73□□□□□ -0.05
APOBP04114 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
APOBP04114 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOBP04114 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOBP04114 AC142472.1-201ENST00000612013 1741 ntBASIC14.72□□□□□ -0.05
APOBP04114 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOBP04114 MIR6722-201ENST00000617286 78 ntBASIC14.72□□□□□ -0.05
APOBP04114 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.72□□□□□ -0.05
APOBP04114 AL138724.1-201ENST00000606771 1088 ntBASIC14.72□□□□□ -0.05
APOBP04114 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
APOBP04114 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.72□□□□□ -0.05
APOBP04114 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOBP04114 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.72□□□□□ -0.05
APOBP04114 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
APOBP04114 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
APOBP04114 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOBP04114 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
APOBP04114 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.71□□□□□ -0.05
APOBP04114 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.71□□□□□ -0.05
APOBP04114 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.71□□□□□ -0.05
APOBP04114 RAP2CP1-201ENST00000605103 478 ntBASIC14.71□□□□□ -0.05
APOBP04114 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOBP04114 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOBP04114 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOBP04114 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOBP04114 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.71□□□□□ -0.05
APOBP04114 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOBP04114 C17orf82-201ENST00000623772 1530 ntBASIC14.71□□□□□ -0.06
APOBP04114 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.71□□□□□ -0.06
APOBP04114 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
APOBP04114 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
APOBP04114 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.71□□□□□ -0.06
APOBP04114 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
APOBP04114 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
APOBP04114 AC090877.2-201ENST00000558441 1738 ntBASIC14.71□□□□□ -0.06
APOBP04114 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOBP04114 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOBP04114 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.7□□□□□ -0.06
APOBP04114 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOBP04114 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
APOBP04114 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
APOBP04114 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOBP04114 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.7□□□□□ -0.06
APOBP04114 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.7□□□□□ -0.06
APOBP04114 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOBP04114 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms