Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 DUX4L10-201ENST00000622460 1267 ntBASIC19.67■□□□□ 0.74
RAB3DO95716 DUX4L25-201ENST00000624915 1269 ntBASIC19.67■□□□□ 0.74
RAB3DO95716 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3DO95716 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3DO95716 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3DO95716 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3DO95716 HLA-L-211ENST00000482052 1765 ntBASIC19.67■□□□□ 0.74
RAB3DO95716 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3DO95716 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
RAB3DO95716 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3DO95716 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3DO95716 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3DO95716 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB3DO95716 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3DO95716 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3DO95716 LINC01971-201ENST00000617888 1048 ntBASIC19.66■□□□□ 0.74
RAB3DO95716 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3DO95716 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3DO95716 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3DO95716 AC233723.2-201ENST00000623798 2106 ntBASIC19.66■□□□□ 0.74
RAB3DO95716 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3DO95716 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB3DO95716 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RAB3DO95716 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB3DO95716 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB3DO95716 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RAB3DO95716 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3DO95716 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAB3DO95716 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.64■□□□□ 0.74
RAB3DO95716 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3DO95716 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB3DO95716 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB3DO95716 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3DO95716 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB3DO95716 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3DO95716 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3DO95716 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3DO95716 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.63■□□□□ 0.73
RAB3DO95716 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB3DO95716 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3DO95716 HLA-V-202ENST00000446817 847 ntBASIC19.63■□□□□ 0.73
RAB3DO95716 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RAB3DO95716 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RAB3DO95716 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3DO95716 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3DO95716 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3DO95716 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3DO95716 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3DO95716 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3DO95716 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3DO95716 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RAB3DO95716 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3DO95716 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3DO95716 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB3DO95716 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB3DO95716 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB3DO95716 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RAB3DO95716 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3DO95716 AC126177.7-201ENST00000547904 679 ntBASIC19.61■□□□□ 0.73
RAB3DO95716 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3DO95716 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAB3DO95716 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3DO95716 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3DO95716 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3DO95716 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB3DO95716 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3DO95716 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3DO95716 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAB3DO95716 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RAB3DO95716 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3DO95716 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB3DO95716 EP400NL-214ENST00000641289 2402 ntBASIC19.6■□□□□ 0.73
RAB3DO95716 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3DO95716 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3DO95716 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3DO95716 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3DO95716 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3DO95716 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
RAB3DO95716 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3DO95716 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3DO95716 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3DO95716 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3DO95716 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3DO95716 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3DO95716 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB3DO95716 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
RAB3DO95716 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3DO95716 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3DO95716 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms