Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHOXO15266 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHOXO15266 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHOXO15266 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SHOXO15266 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SHOXO15266 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHOXO15266 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHOXO15266 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.65■□□□□ 0.74
SHOXO15266 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SHOXO15266 AL359504.2-201ENST00000605506 1601 ntBASIC19.65■□□□□ 0.74
SHOXO15266 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHOXO15266 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.64■□□□□ 0.74
SHOXO15266 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHOXO15266 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SHOXO15266 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SHOXO15266 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHOXO15266 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHOXO15266 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.64■□□□□ 0.73
SHOXO15266 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.64■□□□□ 0.73
SHOXO15266 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHOXO15266 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SHOXO15266 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.64■□□□□ 0.73
SHOXO15266 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHOXO15266 AC007375.3-201ENST00000600936 2314 ntBASIC19.64■□□□□ 0.73
SHOXO15266 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHOXO15266 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHOXO15266 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHOXO15266 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHOXO15266 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SHOXO15266 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHOXO15266 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SHOXO15266 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SHOXO15266 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.63■□□□□ 0.73
SHOXO15266 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHOXO15266 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.63■□□□□ 0.73
SHOXO15266 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SHOXO15266 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHOXO15266 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.62■□□□□ 0.73
SHOXO15266 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 AC092667.1-201ENST00000434301 2586 ntBASIC19.62■□□□□ 0.73
SHOXO15266 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHOXO15266 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.61■□□□□ 0.73
SHOXO15266 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHOXO15266 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHOXO15266 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHOXO15266 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.61■□□□□ 0.73
SHOXO15266 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.61■□□□□ 0.73
SHOXO15266 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHOXO15266 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHOXO15266 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.61■□□□□ 0.73
SHOXO15266 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SHOXO15266 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHOXO15266 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHOXO15266 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHOXO15266 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
SHOXO15266 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHOXO15266 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHOXO15266 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHOXO15266 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHOXO15266 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SHOXO15266 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHOXO15266 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.6■□□□□ 0.73
SHOXO15266 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHOXO15266 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHOXO15266 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHOXO15266 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHOXO15266 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHOXO15266 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.59■□□□□ 0.73
SHOXO15266 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.59■□□□□ 0.73
SHOXO15266 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHOXO15266 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHOXO15266 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHOXO15266 AC010501.1-201ENST00000606270 1962 ntBASIC19.59■□□□□ 0.73
SHOXO15266 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHOXO15266 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHOXO15266 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHOXO15266 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SHOXO15266 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHOXO15266 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SHOXO15266 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHOXO15266 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHOXO15266 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHOXO15266 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.58■□□□□ 0.72
SHOXO15266 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHOXO15266 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHOXO15266 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms