Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 AC013268.4-201ENST00000637413 2228 ntBASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 RPL5P21-201ENST00000404620 815 ntBASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 AC074338.1-201ENST00000416825 156 ntBASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHB1Q9Y5F3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 AC234783.1-201ENST00000441761 496 ntBASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 AC092552.1-201ENST00000547243 906 ntBASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 SNX29P1-201ENST00000548357 1007 ntBASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHB1Q9Y5F3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AC112693.3-201ENST00000624819 1983 ntBASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms