Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 AC007551.1-201ENST00000457394 519 ntBASIC16.8■□□□□ 0.28
USP15Q9Y4E8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 AL158212.4-201ENST00000624062 1286 ntBASIC16.8■□□□□ 0.28
USP15Q9Y4E8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.8■□□□□ 0.28
USP15Q9Y4E8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP15Q9Y4E8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 FAM45BP-202ENST00000592932 1624 ntBASIC16.79■□□□□ 0.28
USP15Q9Y4E8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 AP005117.1-202ENST00000581724 1908 ntBASIC16.79■□□□□ 0.28
USP15Q9Y4E8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 LINC01115-203ENST00000606068 577 ntBASIC16.79■□□□□ 0.28
USP15Q9Y4E8 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 AL139011.1-202ENST00000642063 584 ntBASIC16.79■□□□□ 0.28
USP15Q9Y4E8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 CYP4F24P-201ENST00000586049 1580 ntBASIC16.79■□□□□ 0.28
USP15Q9Y4E8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.79■□□□□ 0.28
USP15Q9Y4E8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms