Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC22.57■■□□□ 1.2
SHANK2Q9UPX8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 TUBB8P8-201ENST00000458717 1058 ntBASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 AC100757.4-201ENST00000626934 759 ntBASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 TUBBP5-203ENST00000508529 1334 ntBASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 LILRP1-201ENST00000444199 1370 ntBASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHANK2Q9UPX8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 E2F3P2-201ENST00000447755 1422 ntBASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 AC114501.1-201ENST00000445949 172 ntBASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 RNMTL1P1-201ENST00000454103 560 ntBASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 AC005740.2-201ENST00000511085 419 ntBASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 AL160314.3-201ENST00000556041 767 ntBASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 Z98259.2-201ENST00000641583 609 ntBASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 AC004899.1-201ENST00000424687 1714 ntBASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC22.55■■□□□ 1.2
SHANK2Q9UPX8 AC112693.3-201ENST00000624819 1983 ntBASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 MIR769-201ENST00000390225 118 ntBASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 AL008707.1-201ENST00000422498 534 ntBASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 VDAC1P1-201ENST00000439229 848 ntBASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 RN7SL11P-201ENST00000471305 293 ntBASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 MROH4P-201ENST00000431302 1578 ntBASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 SLC16A6P1-201ENST00000413214 1059 ntBASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 AC011742.3-201ENST00000439053 820 ntBASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SHANK2Q9UPX8 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms