Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 AL138799.1-201ENST00000448213 1675 ntBASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 DGCR5-201ENST00000399539 862 ntBASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA4Q9UN74 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 AC144831.1-201ENST00000573312 2656 ntBASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 C1QBPP1-201ENST00000400117 770 ntBASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 AC091951.1-201ENST00000512854 2465 ntBASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 SAMD11P1-201ENST00000571429 661 ntBASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 WFDC1-204ENST00000613603 549 ntBASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA4Q9UN74 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 KRT8P22-201ENST00000562317 1415 ntBASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHA4Q9UN74 AC004066.1-201ENST00000502488 802 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms