Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 AC087481.3-201ENST00000602886 1894 ntBASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CUEDC1Q9NWM3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CUEDC1Q9NWM3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CUEDC1Q9NWM3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.08■□□□□ 0.01
CUEDC1Q9NWM3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CUEDC1Q9NWM3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CUEDC1Q9NWM3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.08■□□□□ 0.01
CUEDC1Q9NWM3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AC073347.1-201ENST00000421633 2643 ntBASIC15.08■□□□□ 0
CUEDC1Q9NWM3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AC098614.1-201ENST00000368528 745 ntBASIC15.08■□□□□ 0
CUEDC1Q9NWM3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AC023310.3-201ENST00000557027 670 ntBASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AC100756.1-201ENST00000562736 682 ntBASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AC138749.3-201ENST00000567691 622 ntBASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AC017083.2-201ENST00000608069 979 ntBASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AC116165.1-201ENST00000611806 668 ntBASIC15.08■□□□□ 0
CUEDC1Q9NWM3 AL158212.4-201ENST00000624062 1286 ntBASIC15.08■□□□□ 0
CUEDC1Q9NWM3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 PPT1-215ENST00000641471 2368 ntBASIC15.08■□□□□ 0
CUEDC1Q9NWM3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CUEDC1Q9NWM3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 AL121723.1-201ENST00000445194 1519 ntBASIC15.07■□□□□ 0
CUEDC1Q9NWM3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 AC098799.1-201ENST00000504752 800 ntBASIC15.07■□□□□ 0
CUEDC1Q9NWM3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 TPRX2P-201ENST00000535362 881 ntBASIC15.07■□□□□ 0
CUEDC1Q9NWM3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 AL391069.4-201ENST00000609583 481 ntBASIC15.07■□□□□ 0
CUEDC1Q9NWM3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CUEDC1Q9NWM3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CUEDC1Q9NWM3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms