Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 KRT8P12-202ENST00000472924 1397 ntBASIC16.44■□□□□ 0.22
CD248Q9HCU0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 SPDYE18-201ENST00000510091 1050 ntBASIC16.44■□□□□ 0.22
CD248Q9HCU0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 AC104794.3-201ENST00000566840 1248 ntBASIC16.44■□□□□ 0.22
CD248Q9HCU0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 AC041040.2-201ENST00000622926 2899 ntBASIC16.44■□□□□ 0.22
CD248Q9HCU0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 AC114501.2-201ENST00000439631 535 ntBASIC16.43■□□□□ 0.22
CD248Q9HCU0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 AC044860.1-202ENST00000559481 777 ntBASIC16.43■□□□□ 0.22
CD248Q9HCU0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD248Q9HCU0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.43■□□□□ 0.22
CD248Q9HCU0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.43■□□□□ 0.22
CD248Q9HCU0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 U91328.1-201ENST00000437528 223 ntBASIC16.42■□□□□ 0.22
CD248Q9HCU0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 RN7SL618P-201ENST00000477850 296 ntBASIC16.42■□□□□ 0.22
CD248Q9HCU0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CD248Q9HCU0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 AC140912.1-201ENST00000577171 1054 ntBASIC16.42■□□□□ 0.22
CD248Q9HCU0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.42■□□□□ 0.22
CD248Q9HCU0 AC024267.1-201ENST00000582320 895 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms