Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 AL008707.1-201ENST00000422498 534 ntBASIC16.86■□□□□ 0.29
HIPK3Q9H422 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 MAGEA5-201ENST00000446757 942 ntBASIC16.86■□□□□ 0.29
HIPK3Q9H422 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 AC005730.2-201ENST00000564549 1184 ntBASIC16.86■□□□□ 0.29
HIPK3Q9H422 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 OR10B1P-201ENST00000601666 907 ntBASIC16.86■□□□□ 0.29
HIPK3Q9H422 ZACNP1-201ENST00000612259 710 ntBASIC16.86■□□□□ 0.29
HIPK3Q9H422 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 AC091544.8-201ENST00000619490 361 ntBASIC16.86■□□□□ 0.29
HIPK3Q9H422 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIPK3Q9H422 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HIPK3Q9H422 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 MIR33B-201ENST00000385104 96 ntBASIC16.85■□□□□ 0.29
HIPK3Q9H422 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 AC253536.4-201ENST00000440539 267 ntBASIC16.85■□□□□ 0.29
HIPK3Q9H422 LDHBP1-201ENST00000455730 1119 ntBASIC16.85■□□□□ 0.29
HIPK3Q9H422 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 FGFR3P5-201ENST00000564496 886 ntBASIC16.85■□□□□ 0.29
HIPK3Q9H422 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 KRT8P4-201ENST00000509735 1454 ntBASIC16.85■□□□□ 0.29
HIPK3Q9H422 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HIPK3Q9H422 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HIPK3Q9H422 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK3Q9H422 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK3Q9H422 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK3Q9H422 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HIPK3Q9H422 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HIPK3Q9H422 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HIPK3Q9H422 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK3Q9H422 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK3Q9H422 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK3Q9H422 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK3Q9H422 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HIPK3Q9H422 AL645937.2-201ENST00000396808 931 ntBASIC16.84■□□□□ 0.29
HIPK3Q9H422 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HIPK3Q9H422 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.84■□□□□ 0.29
HIPK3Q9H422 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.84■□□□□ 0.29
HIPK3Q9H422 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.84■□□□□ 0.29
HIPK3Q9H422 FTLP10-202ENST00000505798 471 ntBASIC16.84■□□□□ 0.29
HIPK3Q9H422 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms