Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 AC010327.5-201ENST00000586923 3061 ntBASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 AC074386.1-202ENST00000463561 864 ntBASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 PDPK2P-202ENST00000562415 1191 ntBASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 MYO15B-237ENST00000642007 4893 ntBASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABARAPL3Q9BY60 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 AL135744.1-201ENST00000565098 629 ntBASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 Z83851.2-201ENST00000609564 659 ntBASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.13□□□□□ -0.15
GABARAPL3Q9BY60 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms