Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.74□□□□□ -0.05
NSMCE2Q96MF7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 CYP4F24P-201ENST00000586049 1580 ntBASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 HNRNPUP1-201ENST00000554987 333 ntBASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NSMCE2Q96MF7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 EEF1DP4-201ENST00000446006 880 ntBASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 AL139010.1-201ENST00000454878 894 ntBASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 RNA5SP410-201ENST00000516285 106 ntBASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 AC097359.3-201ENST00000603982 1210 ntBASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 AC005840.4-201ENST00000541242 2494 ntBASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 BX640514.1-201ENST00000583223 1918 ntBASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NSMCE2Q96MF7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms