Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.55■□□□□ 0.08
HMGB4Q8WW32 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGB4Q8WW32 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 AL354989.2-201ENST00000435838 1540 ntBASIC15.54■□□□□ 0.08
HMGB4Q8WW32 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 MTX1P1-201ENST00000440904 838 ntBASIC15.54■□□□□ 0.08
HMGB4Q8WW32 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 HOMER2P2-201ENST00000451621 847 ntBASIC15.54■□□□□ 0.08
HMGB4Q8WW32 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGB4Q8WW32 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 AL591846.1-201ENST00000451736 433 ntBASIC15.53■□□□□ 0.08
HMGB4Q8WW32 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 AC005695.3-201ENST00000614522 232 ntBASIC15.53■□□□□ 0.08
HMGB4Q8WW32 AL008638.5-201ENST00000623814 1298 ntBASIC15.53■□□□□ 0.08
HMGB4Q8WW32 AC006453.4-201ENST00000636949 1252 ntBASIC15.53■□□□□ 0.08
HMGB4Q8WW32 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HMGB4Q8WW32 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms